RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TRMT13Q9NUP7 481 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 BARX2Q9UMQ3 279 aaPredicted RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 MANSC4A6NHS7 340 aaPredicted RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 SGTAO43765 313 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PSMB4P28070 264 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 KYQ8NBH2 561 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 ACTRT2Q8TDY3 377 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 HIC2Q96JB3 615 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 C1QTNF1Q9BXJ1 281 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CLN6Q9NWW5 311 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 C3orf18Q9UK00 162 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 NUP153P49790 1475 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CPED1A4D0V7 1026 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 RSL1D1O76021 490 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CYP3A4P08684 503 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 MYL9P24844 172 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PUS10Q3MIT2 529 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 GRTP1Q5TC63 336 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 OR6Y1Q8NGX8 325 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 TRIM2Q9C040 744 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 POLR1EQ9GZS1 481 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 GNPTGQ9UJJ9 305 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PDE9AO76083 593 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 SAGP10523 405 aaPredicted RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 ELNP15502 786 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PRR36Q9H6K5 1346 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CATP04040 527 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CCNOP22674 350 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 WDR49Q8IV35 697 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PHF10Q8WUB8 498 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 SENP8Q96LD8 212 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 MRPL9Q9BYD2 267 aaKnown RBP18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PLEKHA1Q9HB21 404 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 MBD2Q9UBB5 411 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 PTPRJQ12913 1337 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
SHANK3-202ENST00000414786 CBX2Q14781 532 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 MZT2AQ6P582 158 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 RASGEF1AQ8N9B8 481 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 OR52K1Q8NGK4 314 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ABHD5Q8WTS1 349 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ROPN1BQ9BZX4 212 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ROPN1Q9HAT0 212 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ITGA11Q9UKX5 1188 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 URADA6NGE7 173 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 CCDC166P0CW27 439 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 FDPSP14324 419 aaKnown RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 MANFP55145 182 aaKnown RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 DGKZQ13574 1117 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 LRRC73Q5JTD7 316 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ZDHHC13Q8IUH4 622 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 UGT2B28Q9BY64 529 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ISCUQ9H1K1 167 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 U3KQV3 271 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 TPP1O14773 563 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 IFNA6P05013 189 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 CSN2P05814 226 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ACADSP16219 412 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 GPR158Q5T848 1215 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 SAMD3Q8N6K7 520 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 FAM110BQ8TC76 370 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ANKS1AQ92625 1134 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 MAGEB18Q96M61 343 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 SLC38A2Q96QD8 506 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 AARSD1Q9BTE6 412 aaKnown RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 MAN2A2P49641 1150 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 NEK3P51956 506 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 MED22Q15528 200 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 HECTD3Q5T447 861 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 C9orf64Q5T6V5 341 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ARHGAP36Q6ZRI8 547 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 GALNT5Q7Z7M9 940 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ISCA1Q9BUE6 129 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 XKRYO14609 159 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 GYPCP04921 128 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 FAM228BP0C875 321 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 PHF19Q5T6S3 580 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ZZZ3Q8IYH5 903 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 RIBC1Q8N443 379 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 TEX47Q8TBZ9 253 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 SH3BGRL2Q9UJC5 107 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 OAS3Q9Y6K5 1087 aaKnown RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 BHMG1C9JSJ3 638 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 PRKAR2AP13861 404 aaKnown RBP18.6■□□□□ 0.57
SHANK3-202ENST00000414786 ITPK1Q13572 414 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 DEFB115Q30KQ5 88 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 TOR1AIP1Q5JTV8 583 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 RASGRP3Q8IV61 690 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 SLC4A11Q8NBS3 891 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 PYDC1Q8WXC3 89 aa18.6■□□□□ 0.57
SHANK3-202ENST00000414786 E5RJQ4 531 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 KMOO15229 486 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 MRPS22P82650 360 aaKnown RBP18.59■□□□□ 0.57
SHANK3-202ENST00000414786 NEK5Q6P3R8 708 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 COPG2Q9UBF2 871 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 FBXO33Q7Z6M2 555 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 UBR7Q8N806 425 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 SLC5A5Q92911 643 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms