RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 GALNT3Q14435 633 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 SMAD1Q15797 465 aaKnown RBP10.37□□□□□ -0.75
TRIM27-203ENST00000414543 TCEAL5Q5H9L2 206 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 PITRM1Q5JRX3 1037 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 RALGPS1Q5JS13 557 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 GRTP1Q5TC63 336 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 ESRP1Q6NXG1 681 aaKnown RBP10.37□□□□□ -0.75
TRIM27-203ENST00000414543 GET4Q7L5D6 327 aaPredicted RBP10.37□□□□□ -0.75
TRIM27-203ENST00000414543 NLRP9Q7RTR0 991 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 SRLQ86TD4 932 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 TNS4Q8IZW8 715 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 EFHBQ8N7U6 833 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 MGARPQ8TDB4 240 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 BPIFB1Q8TDL5 484 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 DYDC1Q8WWB3 177 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 SMARCD2Q92925 531 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 CPNE1Q99829 537 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 ADGRE3Q9BY15 652 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 SLC2A11Q9BYW1 496 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 SSU72Q9NP77 194 aaKnown RBP10.37□□□□□ -0.75
TRIM27-203ENST00000414543 NSMCE4AQ9NXX6 385 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 GDE1Q9NZC3 331 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 MARK1Q9P0L2 795 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 GGA2Q9UJY4 613 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 INTS6Q9UL03 887 aaKnown RBP10.37□□□□□ -0.75
TRIM27-203ENST00000414543 CHKBQ9Y259 395 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 PCDHGC4Q9Y5F7 938 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 RAI2Q9Y5P3 530 aa10.37□□□□□ -0.75
TRIM27-203ENST00000414543 NUP210Q8TEM1 1887 aaPredicted RBP10.37□□□□□ -0.75
TRIM27-203ENST00000414543 GOLGA8RI6L899 631 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 K7ERQ8 282 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 LINC01565O15544 149 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 PRPF4O43172 522 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 VAPBO95292 243 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 GLP2RO95838 553 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 PABPC1P11940 636 aaKnown RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 LSP1P33241 339 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 SPRP35270 261 aaPredicted RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 VIPR2P41587 438 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 SULT2A1Q06520 285 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 THOC5Q13769 683 aaKnown RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 BMPR2Q13873 1038 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 DMC1Q14565 340 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 CNGA3Q16281 694 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 FAM78AQ5JUQ0 283 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 TSTD2Q5T7W7 516 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 TEDDM1Q5T9Z0 273 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 MROH9Q5TGP6 573 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 ANKRD54Q6NXT1 300 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 NCEH1Q6PIU2 408 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 TAX1BP1Q86VP1 789 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 GABPB2Q8TAK5 448 aaPredicted RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 BLOC1S5Q8TDH9 187 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 OSCP1Q8WVF1 389 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 LMLNQ96KR4 655 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 ASB16Q96NS5 453 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 TRIB3Q96RU7 358 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 KLF6Q99612 283 aaPredicted RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 TM6SF2Q9BZW4 377 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 IARS2Q9NSE4 1012 aaKnown RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.36□□□□□ -0.75
TRIM27-203ENST00000414543 SLC17A6Q9P2U8 582 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 SLC25A13Q9UJS0 675 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 C2orf16Q68DN1 1984 aa10.36□□□□□ -0.75
TRIM27-203ENST00000414543 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 SMAD6O43541 496 aaKnown RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 PAPSS2O95340 614 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 ADH1CP00326 375 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 HOXB8P17481 243 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 POLR2EP19388 210 aaKnown RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 MAPK8P45983 427 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 SLC18A1P54219 525 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 AP1S1P61966 158 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 PDE1BQ01064 536 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 DNAJC3Q13217 504 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 MSLNQ13421 630 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 DHCR24Q15392 516 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 SEPT7Q16181 437 aaKnown RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 FUT11Q495W5 492 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 ATXN7L2Q5T6C5 722 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 ASTLQ6HA08 431 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 KIAA0930Q6ICG6 404 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 STRA8Q7Z7C7 330 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 PAF1Q8N7H5 531 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 NAT16Q8N8M0 369 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 BRSK1Q8TDC3 778 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 PDCD6IPQ8WUM4 868 aaKnown RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 SGSM3Q96HU1 749 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 SERAC1Q96JX3 654 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 RPL10LQ96L21 214 aaKnown RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 LRRC3BQ96PB8 259 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 AGAP2Q99490 1192 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 TREX1Q9NSU2 369 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 THG1LQ9NWX6 298 aaKnown RBP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRIM27-203ENST00000414543 SLC2A6Q9UGQ3 507 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 PSAT1Q9Y617 370 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 MROH6A6NGR9 719 aa10.35□□□□□ -0.75
TRIM27-203ENST00000414543 GOLGA8TH3BQL2 631 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms