RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 FADS3Q9Y5Q0 445 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 LAMA1P25391 3075 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 DMXL1Q9Y485 3027 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 TRPM6Q9BX84 2022 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 A0A1W2PPC4 97 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 LNP1A1A4G5 178 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 MIF4GDA9UHW6 222 aaKnown RBP13.31□□□□□ -0.28
HDAC8-210ENST00000412342 TIMP2P16035 220 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 CD27P26842 260 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 NR2C2P49116 596 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 RWDD2BP57060 319 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 MAXP61244 160 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 IFI35P80217 286 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-210ENST00000412342 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 GSE1Q14687 1217 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 GRM3Q14832 879 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 PRKD1Q15139 912 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-210ENST00000412342 TMEM259Q4ZIN3 620 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 ODF2Q5BJF6 829 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 KAZNQ674X7 775 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 NEK5Q6P3R8 708 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 KIAA2013Q8IYS2 634 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 RGL4Q8IZJ4 473 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 ZCCHC9Q8N567 271 aaKnown RBP13.31□□□□□ -0.28
HDAC8-210ENST00000412342 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 RAB7BQ96AH8 199 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 ZNF641Q96N77 438 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-210ENST00000412342 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 SUV39H2Q9H5I1 410 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 AMACRQ9UHK6 382 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 ZFR2Q9UPR6 939 aaKnown RBP13.31□□□□□ -0.28
HDAC8-210ENST00000412342 ITM2BQ9Y287 266 aa13.31□□□□□ -0.28
HDAC8-210ENST00000412342 CEP250Q9BV73 2442 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TMEM131Q92545 1883 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3DA0A087WVF3 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3IA0A087WXS9 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3EA0A087X179 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3KA0A087X1G2 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3FA6NER0 549 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3LB9A6J9 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 KCNK1O00180 336 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 WNT9AO14904 365 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 HTRA2O43464 458 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 RNGTTO60942 597 aaKnown RBP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 HLA-DQB2P05538 268 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 SERPINF2P08697 491 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3HP0C7X1 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 CCNB1P14635 433 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 ITIH2P19823 946 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 MAPK8P45983 427 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 SCNN1BP51168 640 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 IRX4P78413 519 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 BNC1Q01954 994 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 CCDC15Q0P6D6 951 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 PDK1Q15118 436 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 DUOXA1Q1HG43 343 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 ZNF284Q2VY69 593 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 RALGPS1Q5JS13 557 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 LRRC73Q5JTD7 316 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 FAM182AQ5T1J6 154 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3GQ6DHY5 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3CQ6IPX1 549 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TBC1D3Q8IZP1 549 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 ARRDC2Q8TBH0 407 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 SNX19Q92543 992 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 SLC6A18Q96N87 628 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 ZNF830Q96NB3 372 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 HEMGNQ9BXL5 484 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 ATP13A3Q9H7F0 1226 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 NOD2Q9HC29 1040 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TM9SF3Q9HD45 589 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 NT5MQ9NPB1 228 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 LZTFL1Q9NQ48 299 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 FSCN3Q9NQT6 498 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 RBM22Q9NW64 420 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 SUSD2Q9UGT4 822 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 TPX2Q9ULW0 747 aaKnown RBP13.3□□□□□ -0.28
HDAC8-210ENST00000412342 SLC6A14Q9UN76 642 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
HDAC8-210ENST00000412342 A0A1W2PQU0 124 aa13.29□□□□□ -0.28
HDAC8-210ENST00000412342 APOC4-APOC2K7ER74 178 aa13.29□□□□□ -0.28
HDAC8-210ENST00000412342 PPP1R12AO14974 1030 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-210ENST00000412342 KHNYNO15037 678 aaKnown RBP13.29□□□□□ -0.28
HDAC8-210ENST00000412342 BCAT2O15382 392 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-210ENST00000412342 NRDCO43847 1150 aa13.29□□□□□ -0.28
HDAC8-210ENST00000412342 GDF9O60383 454 aa13.29□□□□□ -0.28
HDAC8-210ENST00000412342 FOXD2O60548 495 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-210ENST00000412342 SOCS5O75159 536 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms