RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SEPT1Q8WYJ6 367 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 SGCDQ92629 289 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 GLG1Q92896 1179 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 ZKSCAN4Q969J2 545 aaPredicted RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 TMEM125Q96AQ2 219 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 HDAC11Q96DB2 347 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 ELMOD3Q96FG2 381 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 PRR11Q96HE9 360 aaPredicted RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 RUNDC3BQ96NL0 473 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 OR2A14Q96R47 310 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 IWS1Q96ST2 819 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 GAD1Q99259 594 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 MPHOSPH9Q99550 1183 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 ZSWIM1Q9BR11 485 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 MLPHQ9BV36 600 aaPredicted RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 AMBRA1Q9C0C7 1298 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 PLK3Q9H4B4 646 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 PDZD7Q9H5P4 517 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 ASAH2Q9NR71 780 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 FER1L4A9Z1Z3 1794 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 A1L4Q6 167 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 LRRC72A6NJI9 287 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 GRXCR1A8MXD5 290 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 USP17L23D6RBM5 183 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 PGRMC2O15173 223 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 PROM1O43490 865 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 TADA2AO75478 443 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SIX3O95343 332 aaPredicted RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 ERBB2P04626 1255 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 HEXAP06865 529 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 KRT4P19013 534 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 GSTM2P28161 218 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 GKP32189 559 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 RAB28P51157 221 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CAPZA1P52907 286 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 OAZ1P54368 228 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SLC12A3P55017 1021 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 UBASH3AP57075 661 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 YBEYP58557 167 aaPredicted RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 POLR2FP61218 127 aaKnown RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 TUBB4BP68371 445 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 OCA2Q04671 838 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 DEUP1Q05D60 604 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 OLIG2Q13516 323 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 ITGA7Q13683 1181 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 RUNX2Q13950 521 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 RNPS1Q15287 305 aaKnown RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 ALG11Q2TAA5 492 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 FBXO43Q4G163 708 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 IGSF11Q5DX21 431 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 TXNDC8Q6A555 127 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CRIP3Q6Q6R5 217 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CFAP77Q6ZQR2 320 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CLEC17AQ6ZS10 378 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 ADCK2Q7Z695 626 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SPRED1Q7Z699 444 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 DTX2Q86UW9 622 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 TMPRSS6Q8IU80 811 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 ELOA2Q8IYF1 753 aaPredicted RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 SYCP3Q8IZU3 236 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 GHDCQ8N2G8 530 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SIRT6Q8N6T7 355 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 AMER2Q8N7J2 671 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 PNPLA1Q8N8W4 532 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 IQUBQ8NA54 791 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 DENND1AQ8TEH3 1009 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 NSMCE1Q8WV22 266 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 N4BP2L2Q92802 583 aaPredicted RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 CORO2AQ92828 525 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 PTERQ96BW5 349 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CTHRC1Q96CG8 243 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 ARHGEF26Q96DR7 871 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 FAM89AQ96GI7 184 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 PDLIM5Q96HC4 596 aaKnown RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 ERO1AQ96HE7 468 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 HS6ST2Q96MM7 605 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 ADOQ96SZ5 270 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 FERMT1Q9BQL6 677 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 MGME1Q9BQP7 344 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SPXQ9BT56 116 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 NUP85Q9BW27 656 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CINPQ9BW66 212 aaPredicted RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 ACTRT3Q9BYD9 372 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 C1orf21Q9H246 121 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 SLC6A13Q9NSD5 602 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SETD4Q9NVD3 440 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 CHCHD3Q9NX63 227 aaKnown RBP5.07□□□□□ -1.6
LSM5-205ENST00000409952 UPB1Q9UBR1 384 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 KCNE5Q9UJ90 142 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SH3BGRL2Q9UJC5 107 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 RABL2BQ9UNT1 228 aa5.07□□□□□ -1.6
LSM5-205ENST00000409952 SPAG9O60271 1321 aaKnown RBP5.06□□□□□ -1.6
LSM5-205ENST00000409952 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
LSM5-205ENST00000409952 SLC16A3O15427 465 aaKnown RBP5.06□□□□□ -1.6
LSM5-205ENST00000409952 TXNL1O43396 289 aa5.06□□□□□ -1.6
LSM5-205ENST00000409952 STRNO43815 780 aa5.06□□□□□ -1.6
LSM5-205ENST00000409952 TMPRSS11DO60235 418 aa5.06□□□□□ -1.6
LSM5-205ENST00000409952 PRPSAP2O60256 369 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms