RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CDCP1Q9H5V8 836 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF287Q9HBT7 754 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SMOXQ9NWM0 555 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TRNAU1APQ9NX07 287 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SCHIP1Q9P0W5 487 aaPredicted RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ANKMY1Q9P2S6 941 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ZC3H7BQ9UGR2 993 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 GTF2IRD1Q9UHL9 959 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ANAPC7Q9UJX3 599 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 KIAA1257Q9ULG3 409 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 PRR12Q9ULL5 1215 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 RIPK3Q9Y572 518 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 IGF2RP11717 2491 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 PCDH15Q96QU1 1955 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TRIM64A6NGJ6 449 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TTC36A6NLP5 189 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 NT5C1B-RDH14C9J2C7 533 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 HAS3O00219 553 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TULP1O00294 542 aaPredicted RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 XPO1O14980 1071 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 PLA2G6O60733 806 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SIN3BO75182 1162 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 NDUFS2O75306 463 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TRMUO75648 421 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SUN1O94901 812 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 OPRL1P41146 370 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CD97P48960 835 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ALDH18A1P54886 795 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ASPHQ12797 758 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TRIM29Q14134 588 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TMEM132BQ14DG7 1078 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 REXO1Q8N1G1 1221 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CACTIN-AS1Q8N1I8 211 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 DNASE1L2Q92874 299 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 KCTD12Q96CX2 325 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TEX13BQ9BXU2 312 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SLC32A1Q9H598 525 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 IKZF5Q9H5V7 419 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SLITRK6Q9H5Y7 841 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TRMT13Q9NUP7 481 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SPATA6Q9NWH7 488 aaPredicted RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 RMND1Q9NWS8 449 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ZDHHC7Q9NXF8 308 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 KCNK4Q9NYG8 393 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SWAP70Q9UH65 585 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 STARD13Q9Y3M8 1113 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 A8MUA0 341 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 E9PBE3 544 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CLOCKO15516 846 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 AQP9O43315 295 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CHMP2AO43633 222 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 KLHL41O60662 606 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 GRAP2O75791 330 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 VNN1O95497 513 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 EEF2P13639 858 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CXCR2P25025 360 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SMARCA1P28370 1054 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ALDH3A1P30838 453 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 VHLP40337 213 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 FXR2P51116 673 aaKnown RBP eCLIP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ADARP55265 1226 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SLAMF1Q13291 335 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CYTH1Q15438 398 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 UAP1L1Q3KQV9 507 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 MTX3Q5HYI7 312 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SPDYAQ5MJ70 313 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 MROH9Q5TGP6 573 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CYP2R1Q6VVX0 501 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 EID3Q8N140 333 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TEX9Q8N6V9 391 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SMG8Q8ND04 991 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 DEPDC1BQ8WUY9 529 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SIGLEC10Q96LC7 697 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 NEDD4LQ96PU5 975 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 AGAP2Q99490 1192 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 C11orf70Q9BRQ4 267 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SLC7A5P2Q9GIP4 190 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 UBE2TQ9NPD8 197 aaPredicted RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TBC1D14Q9P2M4 693 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 NUB1Q9Y5A7 615 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TEP1Q99973 2627 aaKnown RBP3.16□□□□□ -1.9
RGPD3-202ENST00000409886 KRBA1A5PL33 1030 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 KRT87PA6NCN2 255 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 SPATA31C2B4DYI2 1134 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 E7ENX8 843 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 RAD21O60216 631 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 GMNNO75496 209 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 ITGB1P05556 798 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 STAG3L1P0CL83 205 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 PRKCAP17252 672 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 FMO4P31512 558 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 STIP1P31948 543 aaKnown RBP3.16□□□□□ -1.9
RGPD3-202ENST00000409886 L1CAMP32004 1257 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 CIITAP33076 1130 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 SOX5P35711 763 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 CLCNKBP51801 687 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 IRF9Q00978 393 aa3.16□□□□□ -1.9
RGPD3-202ENST00000409886 CSTF1Q05048 431 aaKnown RBP3.16□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF543Q08ER8 600 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms