RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 KLHL38Q2WGJ6 581 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 C9orf50Q5SZB4 431 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 GLT6D1Q7Z4J2 308 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 LIX1Q8N485 282 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 MED8Q96G25 268 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 ABCB8Q9NUT2 735 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 FLRT1Q9NZU1 646 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 A0A0G2JPF8 293 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 HNRNPCL3B7ZW38 293 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 WFS1O76024 890 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 SLC25A14O95258 325 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-202ENST00000409435 ALPPP05187 535 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 HNRNPCL4P0DMR1 293 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 SLC5A3P53794 718 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 TRAP1Q12931 704 aaKnown RBP7.37□□□□□ -1.23
SCN9A-202ENST00000409435 TRIQKQ629K1 86 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 TAPT1Q6NXT6 567 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 ZNF614Q8N883 585 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 VN1R2Q8NFZ6 395 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 RPLP0P6Q8NHW5 317 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 LRCH3Q96II8 777 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 CELF6Q96J87 481 aaKnown RBP7.37□□□□□ -1.23
SCN9A-202ENST00000409435 SUSD3Q96L08 255 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 ZNF556Q9HAH1 456 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 RPS6KB2Q9UBS0 482 aa7.37□□□□□ -1.23
SCN9A-202ENST00000409435 N4BP2Q86UW6 1770 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-202ENST00000409435 H3BNC9 293 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CBFA2T3O75081 653 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 TALDO1P37837 337 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 TNFSF9P41273 254 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PTPN9P43378 593 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CAV1Q03135 178 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 EIF2S3LQ2VIR3 472 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CBWD3Q5JTY5 395 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CBWD5Q5RIA9 395 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CRTC3Q6UUV7 619 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 ZNF554Q86TJ5 538 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 JADE3Q92613 823 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MIEF2Q96C03 454 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 SNX27Q96L92 541 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 ING3Q9NXR8 418 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 AHSPQ9NZD4 102 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 UVRAGQ9P2Y5 699 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 BAIAP2Q9UQB8 552 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MRPS33Q9Y291 106 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CLDN5O00501 218 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 TEX28O15482 410 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PEX1O43933 1283 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 RFPL2O75678 378 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 SOAT2O75908 522 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 LARGE1O95461 756 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 BCL10O95999 233 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 ENO2P09104 434 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MASP1P48740 699 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PDK2Q15119 407 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 KLHL24Q6TFL4 600 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 FEZF2Q8TBJ5 459 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 HPS1Q92902 700 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 KIFC1Q9BW19 673 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PADI2Q9Y2J8 665 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PIPSLA2A3N6 862 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 SMCO3A2RU48 225 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 LSM8O95777 96 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 ATF4P18848 351 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 COPS2P61201 443 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MBTD1Q05BQ5 628 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 CCDC153Q494R4 210 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MBLAC2Q68D91 279 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 TXNDC8Q6A555 127 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 RTL10Q7L3V2 364 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 RUBCNQ92622 972 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MR1Q95460 341 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 BTN2A3PQ96KV6 586 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 HSFY1Q96LI6 401 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 DPYSL5Q9BPU6 564 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 FBRSQ9HAH7 460 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 TMEM9BQ9NQ34 198 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MUTYHQ9UIF7 546 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 LINC00854A0A1B0GVQ3 168 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 ACSL3O95573 720 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 POP4O95707 220 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PCNAP12004 261 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 NTSR1P30989 418 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 GPC1P35052 558 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 PBX2P40425 430 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 MDH1P40925 334 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 ABCE1P61221 599 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 UGCGQ16739 394 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 POLNQ7Z5Q5 900 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 GALNT4Q8N4A0 578 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 GPR156Q8NFN8 814 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 FAM129BQ96TA1 746 aa7.36□□□□□ -1.23
SCN9A-202ENST00000409435 REXO4Q9GZR2 422 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 FBRSL1Q9HCM7 1045 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 RPRD1BQ9NQG5 326 aaKnown RBP7.36□□□□□ -1.23
SCN9A-202ENST00000409435 FAM153AQ9UHL3 310 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms