RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RELNP78509 3460 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 KRIT1O00522 736 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 TM7SF2O76062 418 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 USP8P40818 1118 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 FOXK1P85037 733 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 SLC6A3Q01959 620 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 ZFP36L1Q07352 338 aaKnown RBP16.9■□□□□ 0.3
CHMP3-203ENST00000409225 KCNAB2Q13303 367 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 IRF4Q15306 451 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 ALG11Q2TAA5 492 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 PHF19Q5T6S3 580 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 BORAQ6PGQ7 559 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 NYAP1Q6ZVC0 841 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 TP53I13Q8NBR0 393 aaPredicted RBP16.9■□□□□ 0.3
CHMP3-203ENST00000409225 C1orf131Q8NDD1 294 aaKnown RBP16.9■□□□□ 0.3
CHMP3-203ENST00000409225 OR6C4Q8NGE1 309 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 CXorf40AQ8TE69 158 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 TMEM159Q96B96 161 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 ARHGEF26Q96DR7 871 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 KLHL32Q96NJ5 620 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 CMKLR1Q99788 373 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 WRAP53Q9BUR4 548 aaKnown RBP16.9■□□□□ 0.3
CHMP3-203ENST00000409225 MAN2B2Q9Y2E5 1009 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 RNF215Q9Y6U7 377 aa16.9■□□□□ 0.3
CHMP3-203ENST00000409225 IGLV3-10A0A075B6K4 115 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 TOR1BO14657 336 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 AREL1O15033 823 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 RASGRP1O95267 797 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 ITIH2P19823 946 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 POLE2P56282 527 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 RNASE9P60153 205 aaKnown RBP16.89■□□□□ 0.29
CHMP3-203ENST00000409225 GNA12Q03113 381 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 DEUP1Q05D60 604 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 C4orf17Q53FE4 359 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 ENPP7Q6UWV6 458 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 ZNF783Q6ZMS7 281 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 SLC26A9Q7LBE3 791 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 TMPRSS9Q7Z410 1059 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 TTC7BQ86TV6 843 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 NPY6RQ99463 290 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 SLC12A9Q9BXP2 914 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 SYNCQ9H7C4 482 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHMP3-203ENST00000409225 ZNF212Q9UDV6 495 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 UNC13CQ8NB66 2214 aa16.89■□□□□ 0.29
CHMP3-203ENST00000409225 CLEC18AA5D8T8 446 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 CD160O95971 181 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 CD82P27701 267 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 ARTNQ5T4W7 220 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 GJB7Q6PEY0 223 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 CLEC18BQ6UXF7 455 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 PLPP6Q8IY26 295 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 CLEC18CQ8NCF0 446 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 GPR156Q8NFN8 814 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 SNX21Q969T3 373 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 ISG20Q96AZ6 181 aaKnown RBP16.88■□□□□ 0.29
CHMP3-203ENST00000409225 C1orf74Q96LT6 269 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 GSDMAQ96QA5 445 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 TBCBQ99426 244 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 RRN3Q9NYV6 651 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 APPL1Q9UKG1 709 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 STAP1Q9ULZ2 295 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 COQ6Q9Y2Z9 468 aa16.88■□□□□ 0.29
CHMP3-203ENST00000409225 NBASA2RRP1 2371 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 BECN2A8MW95 431 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 PSMA7O14818 248 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 GSRP00390 522 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 ACVRL1P37023 503 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 CASRP41180 1078 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 SRP54P61011 504 aaKnown RBP16.87■□□□□ 0.29
CHMP3-203ENST00000409225 STIM1Q13586 685 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 C16orf72Q14CZ0 275 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 POLD3Q15054 466 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-203ENST00000409225 ARHGAP44Q17R89 818 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 PTPN20Q4JDL3 420 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 ATXN7L2Q5T6C5 722 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-203ENST00000409225 TMEM164Q5U3C3 297 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 ISM2Q6H9L7 571 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 SPRED1Q7Z699 444 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 SLITRK4Q8IW52 837 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 SFTPA2Q8IWL1 248 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 ZNF397Q8NF99 534 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-203ENST00000409225 OR2AP1Q8NGE2 309 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 VOPP1Q96AW1 172 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 ZYG11BQ9C0D3 744 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 SEMA6CQ9H3T2 930 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 KLQ9UEF7 1012 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 PAXBP1Q9Y5B6 917 aa16.87■□□□□ 0.29
CHMP3-203ENST00000409225 BLACEA4D250 179 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 TMEM110-MUSTN1A8MSY1 372 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 STMND1H3BQB6 276 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 SMC2O95347 1197 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 POP4O95707 220 aaKnown RBP16.86■□□□□ 0.29
CHMP3-203ENST00000409225 CCL4P13236 92 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 GLB1P16278 677 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 HTR1BP28222 390 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms