RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 ILKQ13418 452 aa22.77■■□□□ 1.24
KDELR3-202ENST00000409006 PDE1CQ14123 709 aaPredicted RBP22.77■■□□□ 1.24
KDELR3-202ENST00000409006 ERMARDQ5T6L9 678 aa22.77■■□□□ 1.24
KDELR3-202ENST00000409006 PPP1R2P3Q6NXS1 205 aa22.77■■□□□ 1.24
KDELR3-202ENST00000409006 DCP2Q8IU60 420 aaKnown RBP22.77■■□□□ 1.24
KDELR3-202ENST00000409006 ASB12Q8WXK4 309 aa22.77■■□□□ 1.24
KDELR3-202ENST00000409006 IFT43Q96FT9 208 aa22.77■■□□□ 1.24
KDELR3-202ENST00000409006 UBA2Q9UBT2 640 aaPredicted RBP22.77■■□□□ 1.24
KDELR3-202ENST00000409006 SHROOM3Q8TF72 1996 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 LY6G6EA0A0G2JKS1 128 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 CSF2P04141 144 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 RABIFP47224 123 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 PAPOLAP51003 745 aaKnown RBP22.76■■□□□ 1.23
KDELR3-202ENST00000409006 PFN3P60673 137 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 INSM1Q01101 510 aaPredicted RBP22.76■■□□□ 1.23
KDELR3-202ENST00000409006 RAD51Q06609 339 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 KLHL30Q0D2K2 578 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 EIF2B5Q13144 721 aaKnown RBP22.76■■□□□ 1.23
KDELR3-202ENST00000409006 ZSCAN30Q86W11 494 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 ZNF653Q96CK0 615 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 APOLD1Q96LR9 279 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 WRAP53Q9BUR4 548 aaKnown RBP22.76■■□□□ 1.23
KDELR3-202ENST00000409006 CPEB1Q9BZB8 566 aaKnown RBP22.76■■□□□ 1.23
KDELR3-202ENST00000409006 DKK3Q9UBP4 350 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 PNMA8BQ9ULN7 279 aaPredicted RBP22.76■■□□□ 1.23
KDELR3-202ENST00000409006 U3KQA8 63 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 LRP4O75096 1905 aa22.76■■□□□ 1.23
KDELR3-202ENST00000409006 COL27A1Q8IZC6 1860 aaPredicted RBP22.75■■□□□ 1.23
KDELR3-202ENST00000409006 PRAMEF11O60813 436 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 NME1P15531 152 aaKnown RBP22.75■■□□□ 1.23
KDELR3-202ENST00000409006 DESP17661 470 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 HTR7P34969 479 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 HNF1BP35680 557 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 IGFALSP35858 605 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 RGRP47804 291 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 NDST2P52849 883 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 DAB2P98082 770 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 AFMIDQ63HM1 303 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 ARHGAP36Q6ZRI8 547 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 VPS36Q86VN1 386 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 PARGQ86W56 976 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 ARHGAP12Q8IWW6 846 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 TP53INP2Q8IXH6 220 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 NPWQ8N729 165 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 DENND6BQ8NEG7 585 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 RFFLQ8WZ73 363 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 ARHGEF26Q96DR7 871 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 MBNL1Q9NR56 388 aaKnown RBP22.75■■□□□ 1.23
KDELR3-202ENST00000409006 MYO1AQ9UBC5 1043 aa22.75■■□□□ 1.23
KDELR3-202ENST00000409006 SYCE3A1L190 88 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 K7ESM1 405 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 SCAMP1O15126 338 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 BUB1BO60566 1050 aaPredicted RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 LRCH4O75427 683 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 TM7SF2O76062 418 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 SERPINC1P01008 464 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 ERCC2P18074 760 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 HNRNPKP61978 463 aaKnown RBP eCLIP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 PPP6R3Q5H9R7 873 aaPredicted RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 RFX8Q6ZV50 586 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 LUZP1Q86V48 1076 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 ZSWIM9Q86XI8 627 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 TP53I13Q8NBR0 393 aaPredicted RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 ZNF548Q8NEK5 533 aaPredicted RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 FNIP1Q8TF40 1166 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 HNRNPLLQ8WVV9 542 aaKnown RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 EDEM3Q9BZQ6 932 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 TCEAL2Q9H3H9 227 aaPredicted RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 CBX8Q9HC52 389 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 NLGN3Q9NZ94 848 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 IPO11Q9UI26 975 aaKnown RBP22.74■■□□□ 1.23
KDELR3-202ENST00000409006 COQ6Q9Y2Z9 468 aa22.74■■□□□ 1.23
KDELR3-202ENST00000409006 RP1P56715 2156 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 PRPSAP2O60256 369 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 RNF8O76064 485 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 CKMT1AP12532 417 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 HOXB3P14651 431 aaPredicted RBP22.73■■□□□ 1.23
KDELR3-202ENST00000409006 TCF4P15884 667 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 SEMG2Q02383 582 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 KLHL40Q2TBA0 621 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 COL28A1Q2UY09 1125 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 HGSNATQ68CP4 663 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 CAMK1DQ8IU85 385 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 RBFAQ8N0V3 343 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 TSEN2Q8NCE0 465 aaKnown RBP22.73■■□□□ 1.23
KDELR3-202ENST00000409006 CXorf40AQ8TE69 158 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 NCAPGQ9BPX3 1015 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 ISCUQ9H1K1 167 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 SUV39H2Q9H5I1 410 aa22.73■■□□□ 1.23
KDELR3-202ENST00000409006 CWC15Q9P013 229 aaKnown RBP22.73■■□□□ 1.23
KDELR3-202ENST00000409006 TSPAN11A1L157 253 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 NEMP2A6NFY4 417 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 ARHGAP42A6NI28 874 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 EIF3CLB5ME19 914 aaKnown RBP22.72■■□□□ 1.23
KDELR3-202ENST00000409006 DAPK3O43293 454 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 PRKCGP05129 697 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 JUNDP17535 347 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 IL1R2P27930 398 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 PBX1P40424 430 aa22.72■■□□□ 1.23
KDELR3-202ENST00000409006 TMEM52BQ4KMG9 183 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms