RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 AFTPHQ6ULP2 937 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 GCNT7Q6ZNI0 430 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 TRMT11Q7Z4G4 463 aaKnown RBP13.06□□□□□ -0.32
RNF43-201ENST00000407977 ITIH5Q86UX2 942 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 FAM20CQ8IXL6 584 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ZNF557Q8N988 423 aaPredicted RBP13.06□□□□□ -0.32
RNF43-201ENST00000407977 HM13Q8TCT9 377 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 EZH1Q92800 747 aaPredicted RBP13.06□□□□□ -0.32
RNF43-201ENST00000407977 SNX15Q9NRS6 342 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 DNAJC28Q9NX36 388 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ZNF222Q9UK12 451 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 LMTK2Q8IWU2 1503 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 LOC110117498-PIK3R3F6TDL0 507 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 USP12O75317 370 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 AVILO75366 819 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 THPOP40225 353 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 STARP49675 285 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 SLC7A2P52569 658 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 UGT2B15P54855 530 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 KLF10Q13118 480 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 RNF180Q86T96 592 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 NKX2-3Q8TAU0 364 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ITCHQ96J02 903 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 TKTL2Q9H0I9 626 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 GNPTGQ9UJJ9 305 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ABCA9Q8IUA7 1624 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 A0A0U1RQJ8 604 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 EPHA3P29320 983 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 CHRNA5P30532 468 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 FAM92BQ6ZTR7 304 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 TFAP2DQ7Z6R9 452 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 MLPHQ9BV36 600 aaPredicted RBP13.06□□□□□ -0.32
RNF43-201ENST00000407977 KCNMB3Q9NPA1 279 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 COG5Q9UP83 839 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 PLLPQ9Y342 182 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 FRMPD1Q5SYB0 1578 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 CCNKO75909 580 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 UPP2O95045 317 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 UMPSP11172 480 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ITGB6P18564 788 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 MAPK8P45983 427 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 GALK1P51570 392 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 BCL2L1Q07817 233 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 TNFAIP8L3Q5GJ75 292 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 POTEHQ6S545 545 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 PACS1Q6VY07 963 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 SPATA19Q7Z5L4 167 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 GPR180Q86V85 440 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 CNTD1Q8N815 330 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 LINC00116Q8NCU8 138 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 SAMD4AQ9UPU9 718 aaKnown RBP13.06□□□□□ -0.32
RNF43-201ENST00000407977 PTPRMP28827 1452 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 ASTN1O14525 1302 aa13.06□□□□□ -0.32
RNF43-201ENST00000407977 LACTBL1A8MY62 500 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 G3V2T6 193 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 THAP5Q7Z6K1 395 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
RNF43-201ENST00000407977 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 EPHB6O15197 1021 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 DNAJA2O60884 412 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 PRG2P13727 222 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 CYP3A7P24462 503 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 C10orf107Q8IVU9 208 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 POMGNT2Q8NAT1 580 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 XPR1Q9UBH6 696 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 SLC9A8Q9Y2E8 581 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 ENDOD1O94919 500 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 OR6A2O95222 327 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 CCNE2O96020 404 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
RNF43-201ENST00000407977 RNF220Q5VTB9 566 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 CRTC3Q6UUV7 619 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 ECHDC2Q86YB7 292 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 RAB43Q86YS6 212 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 PGAM4Q8N0Y7 254 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 SMYD1Q8NB12 490 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 KCTD4Q8WVF5 259 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 BHMTQ93088 406 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 MARK4Q96L34 752 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 S100A13Q99584 98 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 SNRNP25Q9BV90 132 aaKnown RBP13.05□□□□□ -0.32
RNF43-201ENST00000407977 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 TMEM138Q9NPI0 162 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 GIN1Q9NXP7 522 aa13.05□□□□□ -0.32
RNF43-201ENST00000407977 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
RNF43-201ENST00000407977 QSOX1O00391 747 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms