RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TBCCQ15814 346 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 SYPL2Q5VXT5 272 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 ICE2Q659A1 982 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 TANGO2Q6ICL3 276 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 NAPEPLDQ6IQ20 393 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 TBC1D1Q86TI0 1168 aaPredicted RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 NUDCD3Q8IVD9 361 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 PYROXD2Q8N2H3 581 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 FAM3CQ92520 227 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 C7orf26Q96N11 449 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 LGMNQ99538 433 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CPNE1Q99829 537 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CHRDQ9H2X0 955 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 MAGED2Q9UNF1 606 aaPredicted RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 AAR2Q9Y312 384 aaKnown RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CEP295Q9C0D2 2601 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 HHLA1C9JL84 531 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 AXIN1O15169 862 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 WFS1O76024 890 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 MAP3K6O95382 1288 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 SLC2A3P11169 496 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 TDGF1P13385 188 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 CCNCP24863 283 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 PMLP29590 882 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 GP5P40197 560 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 SATB1Q01826 763 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 GALNT2Q10471 571 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 CCDC6Q16204 474 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 OTUD1Q5VV17 481 aaPredicted RBP13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 BSPRYQ5W0U4 402 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF534Q76KX8 674 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 CRLF3Q8IUI8 442 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 NDUFAF2Q8N183 169 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF567Q8N184 647 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 NUP93Q8N1F7 819 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 CFAP61Q8NHU2 1237 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 PPP1R14CQ8TAE6 165 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 ERP27Q96DN0 273 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 TSGA13Q96PP4 275 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 GBA3Q9H227 469 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 STN1Q9H668 368 aaKnown RBP13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 ZFATQ9P243 1243 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 SLC17A7Q9P2U7 560 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 OR12D3Q9UGF7 316 aa13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 ANKRD11Q6UB99 2663 aaPredicted RBP13.08□□□□□ -0.32
SMARCB1-203ENST00000407082 F5P12259 2224 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 CCDC22O60826 627 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 DNAJC6O75061 913 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 RFPL1O75677 317 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 ANXA9O76027 345 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 USP1O94782 785 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 RTN3O95197 1032 aaPredicted RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 C1QAP02745 245 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 MPOP05164 745 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 FYNP06241 537 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 PROS1P07225 676 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 RHOP08100 348 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 HMGA1P17096 107 aaKnown RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 CCND1P24385 295 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 PSMB4P28070 264 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 POLD2P49005 469 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 SLC5A3P53794 718 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 PDE1BQ01064 536 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 CCDC153Q494R4 210 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 PACS1Q6VY07 963 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 LCA5Q86VQ0 697 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 CCDC117Q8IWD4 279 aaPredicted RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 ARHGAP24Q8N264 748 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 SCAMP5Q8TAC9 235 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 NDRG1Q92597 394 aaKnown RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 RMDN2Q96LZ7 410 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 KLF6Q99612 283 aaPredicted RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 TRMT61BQ9BVS5 477 aaKnown RBP13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 IL22Q9GZX6 179 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 TKTL2Q9H0I9 626 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 WWP1Q9H0M0 922 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 MYLK2Q9H1R3 596 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms