RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PPHLN1Q8NEY8 458 aaKnown RBP21.23■□□□□ 0.99
TPM1-208ENST00000404484 IFT43Q96FT9 208 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 NUDCD1Q96RS6 583 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 PAFAH2Q99487 392 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 DHRS4Q9BTZ2 278 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 EURLQ9NYK6 297 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 SOX13Q9UN79 622 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 RPS6KL1Q9Y6S9 549 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 PRR33A8MZF0 331 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 NEDD8-MDP1E9PL57 170 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 MUSKO15146 869 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 ATP9BO43861 1147 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 ALDH1A2O94788 518 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 INHBAP08476 426 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 HLA-DPA1P20036 260 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 NSUN2Q08J23 767 aaKnown RBP eCLIP21.23■□□□□ 0.99
TPM1-208ENST00000404484 DMC1Q14565 340 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 SKIDA1Q1XH10 827 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 KBTBD12Q3ZCT8 623 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 PCID2Q5JVF3 399 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 CERCAMQ5T4B2 595 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 DENND5AQ6IQ26 1287 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 TMEM135Q86UB9 458 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 LRRC6Q86X45 466 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 SLC44A1Q8WWI5 657 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 PLAC1Q9HBJ0 212 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 MRM3Q9HC36 420 aaKnown RBP21.23■□□□□ 0.99
TPM1-208ENST00000404484 ZFP14Q9HCL3 533 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 SCUBE2Q9NQ36 999 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 MOCS1Q9NZB8 636 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 ARIH1Q9Y4X5 557 aaPredicted RBP21.23■□□□□ 0.99
TPM1-208ENST00000404484 WNT6Q9Y6F9 365 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 INSIG1O15503 277 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 ECI2O75521 394 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 SRFP11831 508 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 TYRP14679 529 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 CR2P20023 1033 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 GCAP28676 217 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 VIPR2P41587 438 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 TMED2Q15363 201 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 EMC10Q5UCC4 262 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 ADGRD1Q6QNK2 874 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 KDM7AQ6ZMT4 941 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 ADGRG2Q8IZP9 1017 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.22■□□□□ 0.99
TPM1-208ENST00000404484 BPIFB1Q8TDL5 484 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 OSCP1Q8WVF1 389 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 ELSPBP1Q96BH3 223 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 KIFC1Q9BW19 673 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 TRPV4Q9HBA0 871 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 DUS2Q9NX74 493 aaKnown RBP21.22■□□□□ 0.99
TPM1-208ENST00000404484 SENP1Q9P0U3 644 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 CTNNAL1Q9UBT7 734 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 ACTL7BQ9Y614 415 aa21.22■□□□□ 0.99
TPM1-208ENST00000404484 LOC285095A0A1B0GVY8 99 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 FAM159BA6NKW6 160 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 ADH1CP00326 375 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 FGF1P05230 155 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 CA4P22748 312 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 NUMBP49757 651 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 SERPINH1P50454 418 aaKnown RBP21.21■□□□□ 0.99
TPM1-208ENST00000404484 RHOAP61586 193 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 SULT2A1Q06520 285 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 CDK18Q07002 472 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 LAMB3Q13751 1172 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 EFTUD2Q15029 972 aaKnown RBP eCLIP21.21■□□□□ 0.991e-5■■■□□ 16.7
TPM1-208ENST00000404484 SLC1A5Q15758 541 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 PITRM1Q5JRX3 1037 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 LY6G5CQ5SRR4 150 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 LINGO4Q6UY18 593 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 SLC26A11Q86WA9 606 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 CTAGE3PQ8IX95 158 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 APCDD1Q8J025 514 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 E2F7Q96AV8 911 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 ZNF669Q96BR6 464 aaPredicted RBP21.21■□□□□ 0.99
TPM1-208ENST00000404484 LMLNQ96KR4 655 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 LINC00597Q9H2U6 94 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 CNOT10Q9H9A5 744 aaKnown RBP21.21■□□□□ 0.99
TPM1-208ENST00000404484 ABCB8Q9NUT2 735 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 TBK1Q9UHD2 729 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 ZNF180Q9UJW8 692 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 MIA3Q5JRA6 1907 aa21.21■□□□□ 0.99
TPM1-208ENST00000404484 IQANK1A0A1B0GTG1 560 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 A6NNZ2 444 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 CD160O95971 181 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 PDGFBP01127 241 aaPredicted RBP21.2■□□□□ 0.98
TPM1-208ENST00000404484 C1QAP02745 245 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 TPH1P17752 444 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 ADRA1DP25100 572 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 HPDP32754 393 aaPredicted RBP21.2■□□□□ 0.98
TPM1-208ENST00000404484 CD70P32970 193 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 MAPK8P45983 427 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 SCNN1BP51168 640 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 PPP2R2AP63151 447 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 TUBB8Q3ZCM7 444 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 ANKRD20A4Q4UJ75 823 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 LGSNQ5TDP6 509 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 PKN3Q6P5Z2 889 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 BMP8AQ7Z5Y6 402 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 PPM1NQ8N819 430 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms