RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ARHGEF37A1IGU5 675 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 AKAP10O43572 662 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 DENRO43583 198 aaKnown RBP12.09□□□□□ -0.47
RBM39-206ENST00000403542 BCAS2O75934 225 aaPredicted RBP12.09□□□□□ -0.47
RBM39-206ENST00000403542 SUPT7LO94864 414 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 XIAPP98170 497 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 PTPRCAPQ14761 206 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 PKN3Q6P5Z2 889 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 IFNEQ86WN2 208 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 ATPAF2Q8N5M1 289 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 SMG8Q8ND04 991 aaKnown RBP12.09□□□□□ -0.47
RBM39-206ENST00000403542 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 ANKRD49Q8WVL7 239 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 SENP6Q9GZR1 1112 aaPredicted RBP12.09□□□□□ -0.47
RBM39-206ENST00000403542 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
RBM39-206ENST00000403542 PIF1Q9H611 641 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 ALG9Q9H6U8 611 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 RBM22Q9NW64 420 aaKnown RBP eCLIP12.09□□□□□ -0.473e-7■■■■■ 39
RBM39-206ENST00000403542 GDAP2Q9NXN4 497 aa12.09□□□□□ -0.47
RBM39-206ENST00000403542 PSMD12O00232 456 aaPredicted RBP12.08□□□□□ -0.47
RBM39-206ENST00000403542 FBP2O00757 339 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 UBDO15205 165 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 MAGEB3O15480 346 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 GJB3O75712 270 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 CES1P23141 567 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 SLC5A2P31639 672 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 GRIA3P42263 894 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 GALK1P51570 392 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 GALNT2Q10471 571 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 SEMA3BQ13214 749 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 CAPRIN1Q14444 709 aaKnown RBP12.08□□□□□ -0.47
RBM39-206ENST00000403542 FAM83EQ2M2I3 478 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 ZNF792Q3KQV3 632 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 KRT80Q6KB66 452 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 B3GNT6Q6ZMB0 384 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 CPNE9Q8IYJ1 553 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 TMEM102Q8N9M5 508 aaPredicted RBP12.08□□□□□ -0.47
RBM39-206ENST00000403542 EMID1Q96A84 441 aaPredicted RBP12.08□□□□□ -0.47
RBM39-206ENST00000403542 KLHL5Q96PQ7 755 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 GALNT8Q9NY28 637 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 RNF11Q9Y3C5 154 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 PPP2R3BQ9Y5P8 575 aa12.08□□□□□ -0.47
RBM39-206ENST00000403542 TRIP12Q14669 1992 aaPredicted RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 PRSS51A0A1B0GVH4 220 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 TARM1B6A8C7 271 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 GNAO1P09471 354 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 PIRTP0C851 137 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 RGS2P41220 211 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 KCNC1P48547 511 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 SCNN1BP51168 640 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 SLC7A2P52569 658 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 TMED1Q13445 227 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 KIF19Q2TAC6 998 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 UBXN11Q5T124 520 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 SPPL2BQ8TCT7 592 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 SNRNP27Q8WVK2 155 aaKnown RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 HDAC11Q96DB2 347 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 TMEM209Q96SK2 561 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 ARHGEF38Q9NXL2 777 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 HSFX1Q9UBD0 423 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 FBXO5Q9UKT4 447 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 DERAQ9Y315 318 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 WDR90Q96KV7 1748 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 F8W810 466 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 CXCL11O14625 94 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 HLA-DQB2P05538 268 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 CPB1P15086 417 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 SDHAF4Q5VUM1 108 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 CUZD1Q86UP6 607 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 FAM81AQ8TBF8 368 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 C3orf30Q96M34 536 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 DCUN1D5Q9BTE7 237 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 KIFC1Q9BW19 673 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 SLC39A8Q9C0K1 460 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 MIOSQ9NXC5 875 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 RAB26Q9ULW5 256 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 FNDC3AQ9Y2H6 1198 aaKnown RBP12.08□□□□□ -0.48
RBM39-206ENST00000403542 KCTD3Q9Y597 815 aa12.08□□□□□ -0.48
RBM39-206ENST00000403542 MAGEB16A2A368 324 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TMX2-CTNND1H3BSU7 103 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 PFDN1O60925 122 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TADA2AO75478 443 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 SIX3O95343 332 aaPredicted RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 CASP2P42575 452 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 CD151P48509 253 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 MAPK10P53779 464 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TRIM25Q14258 630 aaKnown RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 PCID2Q5JVF3 399 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 GPR158Q5T848 1215 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 BTBD8Q5XKL5 378 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 DENND5AQ6IQ26 1287 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 NEPROQ6NW34 567 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms