RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 LACTBL1A8MY62 500 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PDHXO00330 501 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 MRASO14807 208 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 SLC25A27O95847 323 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 LGALS2P05162 132 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PGAM1P18669 254 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PPIL2Q13356 520 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 C12orf29Q8N999 325 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 SLC4A11Q8NBS3 891 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 TNIP2Q8NFZ5 429 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 TRPC4APQ8TEL6 797 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 FNIP1Q8TF40 1166 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 ACDQ96AP0 544 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 SNX27Q96L92 541 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 ING2Q9H160 280 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 SNX25Q9H3E2 840 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 UBP1Q9NZI7 540 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 BCLAF3A2AJT9 711 aaKnown RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 LRPAP1P30533 357 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 EFNA5P52803 228 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 MXD4Q14582 209 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 KCNJ8Q15842 424 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 JADE1Q6IE81 842 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PYROXD2Q8N2H3 581 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 STARD8Q92502 1023 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 FCRL3Q96P31 734 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 B3GNT5Q9BYG0 378 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 NCKIPSDQ9NZQ3 722 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 ZNF229Q9UJW7 825 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 ERGIC3Q9Y282 383 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 NEMP2A6NFY4 417 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 KPNA4O00629 521 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 EI24O14681 340 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 TPD52P55327 224 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 ZPBP2Q6X784 338 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 PIGZQ86VD9 579 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 FAM167AQ96KS9 214 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 EHD1Q9H4M9 534 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 RPF1Q9H9Y2 349 aaKnown RBP17.23■□□□□ 0.35
PTPRA-205ENST00000399903 ATP11BQ9Y2G3 1177 aa17.23■□□□□ 0.35
PTPRA-205ENST00000399903 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 AQP9O43315 295 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 SRP72O76094 671 aaKnown RBP17.22■□□□□ 0.35
PTPRA-205ENST00000399903 STAG3L1P0CL83 205 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 TGM2P21980 687 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 SLC7A1P30825 629 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 CASP2P42575 452 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 ASPAP45381 313 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 MBTD1Q05BQ5 628 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 PRKAA1Q13131 559 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 SF3B4Q15427 424 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■■■■■ 28.8
PTPRA-205ENST00000399903 REP15Q6BDI9 236 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 CAMK1DQ8IU85 385 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 WDR49Q8IV35 697 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 HTR3CQ8WXA8 447 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 LPIN3Q9BQK8 851 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 EPS8L2Q9H6S3 715 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 TLL2Q9Y6L7 1015 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 ACKR2O00590 384 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 HSPA8P11142 646 aaKnown RBP17.22■□□□□ 0.35
PTPRA-205ENST00000399903 MAGP20916 626 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 ELK4P28324 431 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 OCA2Q04671 838 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 IFRD2Q12894 506 aaPredicted RBP17.22■□□□□ 0.35
PTPRA-205ENST00000399903 AMHR2Q16671 573 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 INSCQ1MX18 579 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 DPP9Q86TI2 863 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 C1orf127Q8N9H9 656 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 CCDC90BQ9GZT6 254 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 SPAG4Q9NPE6 437 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 PKD2L2Q9NZM6 624 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 SIX4Q9UIU6 781 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 GNPTGQ9UJJ9 305 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 KCNH4Q9UQ05 1017 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 GIT1Q9Y2X7 761 aa17.22■□□□□ 0.35
PTPRA-205ENST00000399903 CCL15-CCL14A0A0B4J2E2 113 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 PSMD11O00231 422 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 RNF103O00237 685 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 ALDH4A1P30038 563 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 OPRL1P41146 370 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 PIGFQ07326 219 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 CAPRIN1Q14444 709 aaKnown RBP17.21■□□□□ 0.35
PTPRA-205ENST00000399903 CCL15Q16663 113 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 KIF19Q2TAC6 998 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 SHCBP1Q8NEM2 672 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 XYLT2Q9H1B5 865 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 MTMR10Q9NXD2 777 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 ATP6V1B2P21281 511 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 MLLT10P55197 1068 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 STX5Q13190 355 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 GEN1Q17RS7 908 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 CCDC14Q49A88 953 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 BOLA3Q53S33 107 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms