RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 YKT6O15498 198 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZW10O43264 779 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CSDE1O75534 798 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCNE2O96020 404 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 GALTP07902 379 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 KRT5P13647 590 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 HNRNPH3P31942 346 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 RPL9P32969 192 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 LSP1P33241 339 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 RFC2P35250 354 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 RPS3AP61247 264 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 LIPEQ05469 1076 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 BAATQ14032 418 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CYP2A13Q16696 494 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYLK3Q32MK0 819 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SGO2Q562F6 1265 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ARSIQ5FYB1 569 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 NHSL2Q5HYW2 709 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF720Q7Z2F6 126 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC105Q8IYK2 499 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 RNF10Q8N5U6 811 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 POU5F2Q8N7G0 328 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 FAM181AQ8N9Y4 354 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 DNAJB8Q8NHS0 232 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC13A3Q8WWT9 602 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRCCQ92733 491 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 FIZ1Q96SL8 496 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CARD9Q9H257 536 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 PPANQ9NQ55 473 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 O00370 1275 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PIAS1O75925 651 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 KITP10721 976 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PTAFRP25105 342 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PSMC2P35998 433 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 EIF3EP60228 445 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 IRF3Q14653 427 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 Q4G0T1 1027 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 DCAF12L1Q5VU92 463 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PDPK2PQ6A1A2 396 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 SEPT14Q6ZU15 432 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 HUS1BQ8NHY5 278 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 SEMA4DQ92854 862 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PSKH2Q96QS6 385 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 TEX12Q9BXU0 123 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF518BQ9C0D4 1074 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRDM8Q9NQV8 689 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 HSF4Q9ULV5 492 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 OR6C65A6NJZ3 312 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ENO4A6NNW6 628 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ISM1B1AKI9 464 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYO1CO00159 1063 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CIDEAO60543 219 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CYTIPO60759 359 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 LILRB5O75023 590 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 HSF2BPO75031 334 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 BRAFP15056 766 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRKACBP22694 351 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 GLRA2P23416 452 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CPT2P23786 658 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CYP3A7P24462 503 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 MARK3P27448 753 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 EPHA8P29322 1005 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ACOT2P49753 483 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PPIDQ08752 370 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 RPS6KA2Q15349 733 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 FAM187BQ17R55 369 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 KCTD21Q4G0X4 260 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZBTB41Q5SVQ8 909 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 LINC00696Q6ZRV3 163 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 RFX6Q8HWS3 928 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 GPC2Q8N158 579 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 POGLUT1Q8NBL1 392 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 KCNE4Q8WWG9 221 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ATG4AQ8WYN0 398 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 TMEM143Q96AN5 459 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 THOC1Q96FV9 657 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 FAM20AQ96MK3 541 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PCDHB18PQ96TA0 734 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC77Q9BR77 488 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 WDR6Q9NNW5 1121 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF536O15090 1300 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 SSU72P8A0A1W2PR75 194 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 FRMD3A2A2Y4 597 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC9B1P1A6NJY1 282 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 PDXKO00764 312 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 DIRAS3O95661 229 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ADH1CP00326 375 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 FTLP02792 175 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ALPPP05187 535 aa6.31□□□□□ -1.4
TRAPPC13-202ENST00000399438 ALPPL2P10696 532 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms