RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 CXorf38Q8TB03 319 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 CDH19Q9H159 772 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 WDR41Q9HAD4 459 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 TJP2Q9UDY2 1190 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 IPO11Q9UI26 975 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 VPS51Q9UID3 782 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 NME7Q9Y5B8 376 aa10.25□□□□□ -0.77
HMGCLL1-205ENST00000398661 ANK1P16157 1881 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 SIP14410 1827 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 FAM159BA6NKW6 160 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 KPNA6O60684 536 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 RALBP11234 206 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 EN2P19622 333 aaPredicted RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 MMP8P22894 467 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 NUMBP49757 651 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 BCAR1P56945 870 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 CUL2Q13617 745 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 OXA1LQ15070 435 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 SF3B4Q15427 424 aaKnown RBP eCLIP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 LSM12Q3MHD2 195 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 NHSL2Q5HYW2 709 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 GALNT18Q6P9A2 607 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TRMT10BQ6PF06 316 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 UNC5AQ6ZN44 842 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZNF354CQ86Y25 554 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 RFX6Q8HWS3 928 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 FAM126BQ8IXS8 530 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 CADM3Q8N126 398 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 C3orf58Q8NDZ4 430 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TNIP2Q8NFZ5 429 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 LINC01599Q8WXQ3 324 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ACDQ96AP0 544 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 HPDLQ96IR7 371 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 OR52B2Q96RD2 323 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 CIB1Q99828 191 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 MROQ9BYG7 248 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 SIAEQ9HAT2 523 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 DUS2Q9NX74 493 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 KLHL3Q9UH77 587 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TIMM22Q9Y584 194 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 CPQQ9Y646 472 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TCRBV5S1A1TA0A578 114 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ARL5CA6NH57 179 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 MOXD2PA6NHM9 499 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 NOL3O60936 208 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ASS1P00966 412 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TNNC2P02585 160 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZNF182P17025 639 aaPredicted RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TCN1P20061 433 aaPredicted RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TCEA1P23193 301 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 KDELR1P24390 212 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ASPAP45381 313 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 NFATC3Q12968 1075 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 MTX3Q5HYI7 312 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 FAXCQ5TGI0 409 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 SLC9A4Q6AI14 798 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 DARS2Q6PI48 645 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 USP37Q86T82 979 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 FAM156AQ8NDB6 213 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 MAPK15Q8TD08 544 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 DEPDC1BQ8WUY9 529 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TFAP2BQ92481 460 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 TFAP2CQ92754 450 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 B3GALT6Q96L58 329 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZNF641Q96N77 438 aaPredicted RBP10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 ALPK1Q96QP1 1244 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 C1orf50Q9BV19 199 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 KLHL25Q9H0H3 589 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 CISHQ9NSE2 258 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 SEPT3Q9UH03 358 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 CDY1Q9Y6F8 540 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 DNAH14Q0VDD8 3507 aa10.24□□□□□ -0.77
HMGCLL1-205ENST00000398661 MYO15AQ9UKN7 3530 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CROCCQ5TZA2 2017 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 C1orf232A0A0U1RR37 186 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 NT5C1B-RDH14C9J2C7 533 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 AKAP10O43572 662 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CALB1P05937 261 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 LMO2P25791 158 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 GRM5P41594 1212 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CLCNKBP51801 687 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ROR1Q01973 937 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 NME3Q13232 169 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ART3Q13508 389 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ARHGEF6Q15052 776 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TAZQ16635 292 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 KCNT1Q5JUK3 1230 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 FAM182AQ5T1J6 154 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 FRA10AC1Q70Z53 315 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CAND1Q86VP6 1230 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TTC30AQ86WT1 665 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZC3H7AQ8IWR0 971 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZNF781Q8N8C0 355 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 NIPA2Q8N8Q9 360 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms