RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ANKRD36A6QL64 1941 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 APOC4-APOC2K7ER74 178 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 WNT9AO14904 365 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 APOC2P02655 101 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 MMP2P08253 660 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 RENBPP51606 427 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 NEK3P51956 506 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 PLA2G2CQ5R387 149 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 KIAA0895LQ68EN5 471 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 TCEAL6Q6IPX3 200 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 SLC35F6Q8N357 371 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 TRIM58Q8NG06 486 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 OR2T34Q8NGX1 318 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 C1orf216Q8TAB5 229 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 NSMCE1Q8WV22 266 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 KLK6Q92876 244 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 TCEAL3Q969E4 200 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 QKIQ96PU8 341 aaKnown RBP eCLIP15.94■□□□□ 0.14
MBD1-207ENST00000398488 ALS2CR12Q96Q35 445 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 SMIM14Q96QK8 99 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 OSBPL1AQ9BXW6 950 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 SCUBE2Q9NQ36 999 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 FSCN3Q9NQT6 498 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 PILRBQ9UKJ0 227 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 RIF1Q5UIP0 2472 aaKnown RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3DA0A087WVF3 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3IA0A087WXS9 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3EA0A087X179 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3KA0A087X1G2 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TSPAN11A1L157 253 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3FA6NER0 549 aaPredicted RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3LB9A6J9 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 PPP1R12AO14974 1030 aaPredicted RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 SLC7A4O43246 635 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 ZSCAN12O43309 604 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3HP0C7X1 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 PTPN3P26045 913 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 RBL1P28749 1068 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 MAT2AP31153 395 aaKnown RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 MPLP40238 635 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 RAD51Q06609 339 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 ITKQ08881 620 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 ZNF569Q5MCW4 686 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 SPDYCQ5MJ68 293 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 SEL1L3Q68CR1 1132 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3GQ6DHY5 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 ALG1LQ6GMV1 187 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3CQ6IPX1 549 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 FBXL19Q6PCT2 694 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 CYP2U1Q7Z449 544 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 ADAT2Q7Z6V5 191 aaKnown RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 TBC1D3Q8IZP1 549 aaPredicted RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 TFB1MQ8WVM0 346 aaKnown RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 DNASE2BQ8WZ79 361 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 RUBCNQ92622 972 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 ECHDC3Q96DC8 303 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 DYRK4Q9NR20 520 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 NCDNQ9UBB6 729 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 DKK3Q9UBP4 350 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 EIF2B4Q9UI10 523 aaKnown RBP15.93■□□□□ 0.14
MBD1-207ENST00000398488 TTLL3Q9Y4R7 772 aa15.93■□□□□ 0.14
MBD1-207ENST00000398488 KCNK3O14649 394 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 AREL1O15033 823 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 HTRA2O43464 458 aaPredicted RBP15.92■□□□□ 0.14
MBD1-207ENST00000398488 RNGTTO60942 597 aaKnown RBP15.92■□□□□ 0.14
MBD1-207ENST00000398488 PDHA1P08559 390 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 LAMA1P25391 3075 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 CXCR5P32302 372 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 CD68P34810 354 aaPredicted RBP15.92■□□□□ 0.14
MBD1-207ENST00000398488 HSPA9P38646 679 aaKnown RBP15.92■□□□□ 0.14
MBD1-207ENST00000398488 AP1S1P61966 158 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 BCL2L1Q07817 233 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 FGL2Q14314 439 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 SF3A2Q15428 464 aaKnown RBP15.92■□□□□ 0.14
MBD1-207ENST00000398488 CCDC181Q5TID7 509 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 TTC7BQ86TV6 843 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 SNX19Q92543 992 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 PPP1R16AQ96I34 528 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 ZNF641Q96N77 438 aaPredicted RBP15.92■□□□□ 0.14
MBD1-207ENST00000398488 AGAP3Q96P47 875 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 TUBGCP5Q96RT8 1024 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 ATP13A3Q9H7F0 1226 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 RXFP3Q9NSD7 469 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 GMEB2Q9UKD1 530 aa15.92■□□□□ 0.14
MBD1-207ENST00000398488 ZNF292O60281 2723 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 PLXNA2O75051 1894 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 A0A1W2PQU0 124 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 LRRC72A6NJI9 287 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 MEI4A8MW99 385 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 H7C0C1 242 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 TJP3O95049 919 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 ATP1A1P05023 1023 aaKnown RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 ATP5OP48047 213 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 EIF3EP60228 445 aaKnown RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 SKOR1P84550 965 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 SFSWAPQ12872 951 aaKnown RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 SIX1Q15475 284 aaPredicted RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 TEX44Q53QW1 395 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 SLC45A4Q5BKX6 768 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 PEAR1Q5VY43 1037 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms