RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TIMM50Q3ZCQ8 353 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 KLHDC10Q6PID8 442 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 ERI1Q8IV48 349 aaKnown RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 ZHX1-C8orf76Q96EF9 292 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 SMPD3Q9NY59 655 aaPredicted RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 LMCD1Q9NZU5 365 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 BTRCQ9Y297 605 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 TEX264Q9Y6I9 313 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 MYH15Q9Y2K3 1946 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 LOC100506127A0A0U1RQW1 187 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 CXorf49A8MYA2 514 aaPredicted RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 KCNH1O95259 989 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 MLYCDO95822 493 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 GUCA1CO95843 209 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 CCR3P51677 355 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 THOP1P52888 689 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 IL2P60568 153 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 GRM3Q14832 879 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 NCF4Q15080 339 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 MAPKAPK3Q16644 382 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 HS6ST3Q8IZP7 471 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 TMEM132CQ8N3T6 1108 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 NXNL1Q96CM4 212 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 DEPDC7Q96QD5 511 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 NMRK2Q9NPI5 230 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 TUBA8Q9NY65 449 aaPredicted RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 PLK2Q9NYY3 685 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 H2AFY2Q9P0M6 372 aaPredicted RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 COL20A1Q9P218 1284 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 CCDC189A1A4V9 331 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 FAM149AA5PLN7 773 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 FGF10O15520 208 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 MFSD11O43934 449 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ZBTB11O95625 1053 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 CST1P01037 141 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ITGAXP20702 1163 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 OR1G1P47890 313 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 GAD2Q05329 585 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 CDK18Q07002 472 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 PSMD5Q16401 504 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 RFX4Q33E94 735 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 TIGD2Q4W5G0 525 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 TEX44Q53QW1 395 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 FRMD7Q6ZUT3 714 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 LUZP2Q86TE4 346 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 B3GALNT2Q8NCR0 500 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 FBXO32Q969P5 355 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 CENPNQ96H22 339 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 RHOBTB2Q9BYZ6 727 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 NUDT5Q9UKK9 219 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 PRG3Q9Y2Y8 225 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 SNED1Q8TER0 1413 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 SLC22A2O15244 555 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 RGS14O43566 566 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 AP2A1O95782 977 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 DPEP1P16444 411 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 IL1R2P27930 398 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 FMO4P31512 558 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 KLF1Q13351 362 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 DENND1AQ8TEH3 1009 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 SERPINB11Q96P15 392 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ADI1Q9BV57 179 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 REEP1Q9H902 201 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 DUSP12Q9UNI6 340 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 TNPO3Q9Y5L0 923 aaKnown RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 SLC12A8A0AV02 714 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ZBTB7AO95365 584 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 VNN1O95497 513 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 METTL18O95568 372 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 IFNA14P01570 189 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 CFHP08603 1231 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 XRCC1P18887 633 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 ADRA1BP35368 520 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 RAB14P61106 215 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 SFT2D3Q587I9 215 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 NECAB2Q7Z6G3 386 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 NKAPQ8N5F7 415 aaKnown RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 C1orf127Q8N9H9 656 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 TEKT5Q96M29 485 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 CATSPERZQ9NTU4 200 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ZMYM5Q9UJ78 669 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 TBC1D30Q9Y2I9 924 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 MGAT4DA6NG13 374 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 A6NHS1 94 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 ITM2AO43736 263 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 RPS9P46781 194 aaKnown RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 MRPS5P82675 430 aaKnown RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 TP53BP2Q13625 1128 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 INO80DQ53TQ3 878 aaPredicted RBP11.13□□□□□ -0.63
HPS4-202ENST00000398145 CRTC3Q6UUV7 619 aa11.13□□□□□ -0.63
HPS4-202ENST00000398145 SLC26A9Q7LBE3 791 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms