RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 RAD21L1Q9H4I0 556 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 PSME2Q9UL46 239 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 FSBPO95073 299 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 RPL38P63173 70 aaKnown RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 OASLQ15646 514 aaKnown RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 ALG11Q2TAA5 492 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 KRT73Q86Y46 540 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 PTGR2Q8N8N7 351 aaPredicted RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 FBXO30Q8TB52 745 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 PBX3P40426 434 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 FNBP1LQ5T0N5 605 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 FUT10Q6P4F1 479 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 DHFR2Q86XF0 187 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 RELTQ969Z4 430 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 SIRPGQ9P1W8 387 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 UGT2B4P06133 528 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 FAM153BP0C7A2 387 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 FAM153CQ494X1 144 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 GPR135Q8IZ08 494 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 LMLNQ96KR4 655 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 SERHL2Q9H4I8 314 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 SERHLQ9NQF3 203 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 DLGAP2Q9P1A6 1054 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 PIGNO95427 931 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ITPKAP23677 461 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 SLC5A3P53794 718 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 DYNC1I2Q13409 638 aaKnown RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 NPAS4Q8IUM7 802 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 STARD8Q92502 1023 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 FAIM2Q9BWQ8 316 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 OR6C75A6NL08 312 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 DMGDHQ9UI17 866 aaKnown RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 PSMD13Q9UNM6 376 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ZNF780BQ9Y6R6 833 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 IQCMA0A1B0GVH7 501 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 MRASO14807 208 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 TSC22D2O75157 780 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ZCCHC18P0CG32 403 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 MATKP42679 507 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 MON1AQ86VX9 555 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 LINGO1Q96FE5 620 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 OXNAD1Q96HP4 312 aaPredicted RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 HSFY1Q96LI6 401 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ARHGEF3Q9NR81 526 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ARHGAP28Q9P2N2 729 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ZFP37Q9Y6Q3 630 aaPredicted RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 TFEBP19484 476 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ADGRG2Q8IZP9 1017 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 ARL14EPQ8N8R7 260 aaPredicted RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 AUTS2Q8WXX7 1259 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
TTC28-201ENST00000397906 TNPO3Q9Y5L0 923 aaKnown RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 NFATC1O95644 943 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 LPOP22079 712 aaPredicted RBP11.42□□□□□ -0.58
TTC28-201ENST00000397906 FASP25445 335 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 FOXM1Q08050 763 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 COX10Q12887 443 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 OLFM1Q99784 485 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 KLHL4Q9C0H6 718 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 TBC1D23Q9NUY8 699 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 EVLQ9UI08 416 aaPredicted RBP11.42□□□□□ -0.58
TTC28-201ENST00000397906 PER2O15055 1255 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 DUSP11O75319 330 aaKnown RBP11.42□□□□□ -0.58
TTC28-201ENST00000397906 FPGSQ05932 587 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 HDAC10Q969S8 669 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 C1orf50Q9BV19 199 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 DPEP2Q9H4A9 486 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 RWDD3Q9Y3V2 267 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 SMIM28A0A1B0GU29 152 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 LINC00032P0C843 101 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
TTC28-201ENST00000397906 CYP2C18P33260 490 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 CPSF6Q16630 551 aaKnown RBP eCLIP11.42□□□□□ -0.58
TTC28-201ENST00000397906 MOSPD2Q8NHP6 518 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 ITFG1Q8TB96 612 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 CERS2Q96G23 380 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 GCATO75600 419 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 VIPP01282 170 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 CFIP05156 583 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 TALDO1P37837 337 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 CYP4F8P98187 520 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 UBE2E3Q969T4 207 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 RAD51AP1Q96B01 352 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 COL1A2P08123 1366 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.42□□□□□ -0.58
TTC28-201ENST00000397906 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 SCN2BO60939 215 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 NR2F1P10589 423 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 PTSQ03393 145 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 ISLR2Q6UXK2 745 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 KLK6Q92876 244 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 RIPOR3Q96MK2 946 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 IQCF5A8MTL0 148 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 MCIDASD6RGH6 385 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 ZNF135P52742 658 aaPredicted RBP11.42□□□□□ -0.58
TTC28-201ENST00000397906 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
TTC28-201ENST00000397906 SNX32Q86XE0 403 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms