RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ACTRT2Q8TDY3 377 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 KLHL5Q96PQ7 755 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 VCX3BQ9H321 246 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 VCX3AQ9NNX9 186 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MID2Q9UJV3 735 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MYO16Q9Y6X6 1858 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TARM1B6A8C7 271 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 HDAC3O15379 428 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 H2AFYO75367 372 aaKnown RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CCND3P30281 292 aaPredicted RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MLLT6P55198 1093 aaPredicted RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ITKQ08881 620 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZNF789Q5FWF6 425 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PPM1LQ5SGD2 360 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SEL1L3Q68CR1 1132 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 RGMBQ6NW40 437 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CCNYL1Q8N7R7 359 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SLC26A7Q8TE54 656 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CCDC97Q96F63 343 aaPredicted RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 GPR78Q96P69 363 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZNF184Q99676 751 aaPredicted RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TREX1Q9NSU2 369 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 J3KR12 359 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 WNT3AP56704 352 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 USP46P62068 366 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TBL3Q12788 808 aaKnown RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TMEM198Q66K66 360 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TIGD7Q6NT04 549 aaPredicted RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PGM2L1Q6PCE3 622 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CNSTQ6PJW8 725 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SAPCD2Q86UD0 394 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZNF598Q86UK7 904 aaKnown RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 LSMEM2Q8N112 164 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 RDH11Q8TC12 318 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 UROC1Q96N76 676 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZIC5Q96T25 663 aa18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PRG3Q9Y2Y8 225 aaPredicted RBP18.53■□□□□ 0.56
CHRFAM7A-202ENST00000397827 GRID2O43424 1007 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CCNT2O60583 730 aaKnown RBP18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PFDN1O60925 122 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TBX18O95935 607 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PENKP01210 267 aaPredicted RBP18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TYMPP19971 482 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 INHBCP55103 352 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 RBM20Q5T481 1227 aaKnown RBP18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 AFMIDQ63HM1 303 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SERPINB11Q96P15 392 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 NT5MQ9NPB1 228 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 NMRK2Q9NPI5 230 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TMCO1Q9UM00 188 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ARHGAP26Q9UNA1 814 aa18.52■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PATJQ8NI35 1801 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NEMP2A6NFY4 417 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TMEM233B4DJY2 109 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 AIM2O14862 343 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CNTN5O94779 1100 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CCNIQ14094 377 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TSTD2Q5T7W7 516 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TMCO4Q5TGY1 634 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 IZUMO2Q6UXV1 221 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RTN4RL1Q86UN2 441 aaPredicted RBP18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PABPC5Q96DU9 382 aaKnown RBP18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MARK4Q96L34 752 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 GPAMQ9HCL2 828 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 S100A14Q9HCY8 104 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FBXO5Q9UKT4 447 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 POMPQ9Y244 141 aa18.52■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HAPLN1P10915 354 aaPredicted RBP18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLC10A7Q0GE19 358 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ZRSR2Q15696 482 aaKnown RBP18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 LRRC36Q1X8D7 754 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ALFQ53S48 1182 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 METTL21CQ5VZV1 264 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NXNQ6DKJ4 435 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NEPROQ6NW34 567 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RNF111Q6ZNA4 994 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ZNF354CQ86Y25 554 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RNF135Q8IUD6 432 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TTC9BQ8N6N2 239 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 C2CD4AQ8NCU7 369 aaPredicted RBP18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HMCESQ96FZ2 354 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PCDHB8Q9UN66 801 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 hCG_2014768A0A024R1R8 64 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PEX11BO96011 259 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 OR1G1P47890 313 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CD151P48509 253 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRKCZQ05513 592 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 BTKQ06187 659 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CNPY1Q3B7I2 92 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HEXDCQ8WVB3 486 aa18.51■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CCL22O00626 93 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FKBP6O75344 327 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SOAT2O75908 522 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PAMP19021 973 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PIK3R1P27986 724 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HTR7P34969 479 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CD86P42081 329 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 EFEMP1Q12805 493 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRKAA1Q13131 559 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 IHHQ14623 411 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms