RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TSGA13Q96PP4 275 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 EBNA1BP2Q99848 306 aaKnown RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 FERMT1Q9BQL6 677 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 ACE2Q9BYF1 805 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 C8orf33Q9H7E9 229 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 HEBP1Q9NRV9 189 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 ZC3H7BQ9UGR2 993 aaKnown RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 DUSP12Q9UNI6 340 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 PIAS3Q9Y6X2 628 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 MYO18AQ92614 2054 aaKnown RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 SPECC1L-ADORA2AF8WAN1 911 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 SNX3O60493 162 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 MAFKO60675 156 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 ZWINTO95229 277 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 TAC1P20366 129 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 CCNCP24863 283 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 CTHP32929 405 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 IL9RQ01113 521 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 IL10RBQ08334 325 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 GEN1Q17RS7 908 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 PARP6Q2NL67 630 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 SYCP2LQ5T4T6 812 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 LRRC8BQ6P9F7 803 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 KIAA0907Q7Z7F0 614 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 ZNF567Q8N184 647 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 ACDQ96AP0 544 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 CHFRQ96EP1 664 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 VPS51Q9UID3 782 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 INTS6Q9UL03 887 aaKnown RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 IQANK1A0A1B0GTG1 560 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 FAM159BA6NKW6 160 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 J3KR12 359 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SNAP91O60641 907 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 PRAMEF11O60813 436 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 KIAA0754O94854 1291 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 CPP00450 1065 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 VIMP08670 466 aaKnown RBP15.09■□□□□ 0.01
CAPN3-207ENST00000397200 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
CAPN3-207ENST00000397200 GLDCP23378 1020 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SARNPP82979 210 aaKnown RBP15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SLC18A2Q05940 514 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SULT2A1Q06520 285 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SPARCL1Q14515 664 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 FAM182AQ5T1J6 154 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 MBLAC2Q68D91 279 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 NAIF1Q69YI7 327 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-207ENST00000397200 RETSATQ6NUM9 610 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 UNC5AQ6ZN44 842 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SH2D5Q6ZV89 423 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 NUDT18Q6ZVK8 323 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 PRPF39Q86UA1 669 aaKnown RBP15.09■□□□□ 0.01
CAPN3-207ENST00000397200 ADIPOR2Q86V24 386 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SLC26A11Q86WA9 606 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 RALGPS2Q86X27 583 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-207ENST00000397200 KLHDC8BQ8IXV7 354 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 C4orf33Q8N1A6 199 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 TERB1Q8NA31 727 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 GSDMBQ8TAX9 411 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 NSMCE1Q8WV22 266 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 CABS1Q96KC9 395 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 P2RY13Q9BPV8 354 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SEPT10Q9P0V9 454 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 SAMD15Q9P1V8 674 aa15.09■□□□□ 0.01
CAPN3-207ENST00000397200 TBC1D3BA6NDS4 549 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 MATN3O15232 486 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 TM9SF1O15321 606 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 MTSS1O43312 755 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 SPAG7O75391 227 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 KAT7O95251 611 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 APODP05090 189 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 GLULP15104 373 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 PTPN3P26045 913 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 FOXN2P32314 431 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 RPA3P35244 121 aaPredicted RBP15.08■□□□□ 0
CAPN3-207ENST00000397200 GRIA2P42262 883 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 IFT88Q13099 833 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 PDK4Q16654 411 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 LACTB2Q53H82 288 aaPredicted RBP15.08■□□□□ 0
CAPN3-207ENST00000397200 RNF135Q8IUD6 432 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0
CAPN3-207ENST00000397200 MPP5Q8N3R9 675 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 PHTF2Q8N3S3 785 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 BANPQ8N9N5 519 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 GDAP1Q8TB36 358 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 CFAP36Q96G28 342 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 MSANTD3Q96H12 275 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 ZNF599Q96NL3 588 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 CIPCQ9C0C6 399 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 MLXIPLQ9NP71 852 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 UBA2Q9UBT2 640 aaPredicted RBP15.08■□□□□ 0
CAPN3-207ENST00000397200 SLC25A13Q9UJS0 675 aa15.08■□□□□ 0
CAPN3-207ENST00000397200 KCNK1O00180 336 aa15.07■□□□□ 0
CAPN3-207ENST00000397200 ZMPSTE24O75844 475 aa15.07■□□□□ 0
CAPN3-207ENST00000397200 ALDH1A2O94788 518 aa15.07■□□□□ 0
CAPN3-207ENST00000397200 SUN1O94901 812 aa15.07■□□□□ 0
CAPN3-207ENST00000397200 ATP5BP06576 529 aaKnown RBP15.07■□□□□ 0
CAPN3-207ENST00000397200 INHBAP08476 426 aa15.07■□□□□ 0
CAPN3-207ENST00000397200 KRT4P19013 534 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms