RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LY6G5CQ5SRR4 150 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 SFTPA1Q8IWL2 248 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 PPIL6Q8IXY8 311 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 DEFB124Q8NES8 71 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FIBINQ8TAL6 211 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FBXO25Q8TCJ0 367 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FMO2Q99518 471 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FEM1AQ9BSK4 669 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 HAUS2Q9NVX0 235 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
SEC13-209ENST00000397117 VPS28Q9UK41 221 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 TTLL3Q9Y4R7 772 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 SPEGQ15772 3267 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 SRRM3A6NNA2 597 aaPredicted RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 SMAPO00193 183 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 CBX4O00257 560 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 KDELR3O43731 214 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 PRAMEF11O60813 436 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 CSKP41240 450 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 LMAN1P49257 510 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 LMAN2Q12907 356 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 HNRNPDQ14103 355 aaKnown RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 PARP6Q2NL67 630 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 FAM182AQ5T1J6 154 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 RNASEH2BQ5TBB1 312 aaKnown RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 MARC1Q5VT66 337 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 HIBCHQ6NVY1 386 aaPredicted RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 ZDHHC24Q6UX98 284 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 BBS5Q8N3I7 341 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 FRMD1Q8N878 549 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 IL17RCQ8NAC3 791 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 OR52K2Q8NGK3 314 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 HNRNPLLQ8WVV9 542 aaKnown RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 RLN3Q8WXF3 142 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 MAML1Q92585 1016 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 TEKT5Q96M29 485 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 ZNF599Q96NL3 588 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 ARFGAP3Q9NP61 516 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 ZDHHC18Q9NUE0 388 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 TMEM74BQ9NUR3 256 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 RBM22Q9NW64 420 aaKnown RBP eCLIP13.43□□□□□ -0.267e-11■■■■■ 30.5
SEC13-209ENST00000397117 MARK1Q9P0L2 795 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 RSPH14Q9UHP6 348 aa13.43□□□□□ -0.26
SEC13-209ENST00000397117 MBD1Q9UIS9 605 aaPredicted RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 DSPP15924 2871 aaKnown RBP13.43□□□□□ -0.26
SEC13-209ENST00000397117 ZBTB24O43167 697 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 METTL18O95568 372 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 TYRP14679 529 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 MZF1P28698 734 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 ECHS1P30084 290 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 NUMBP49757 651 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 PRPSAP1Q14558 356 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 DHCR24Q15392 516 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 MAP7D1Q3KQU3 841 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 HSF5Q4G112 596 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 TRIM61Q5EBN2 209 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 FAXCQ5TGI0 409 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 TMCO4Q5TGY1 634 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 RHBDF2Q6PJF5 856 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 LPCAT2Q7L5N7 544 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 PIP4P1Q86T03 277 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 SYT12Q8IV01 421 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 TXNDC5Q8NBS9 432 aaKnown RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 WFDC5Q8TCV5 224 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 AENQ8WTP8 325 aaKnown RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 CPT1BQ92523 772 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 IL12RB2Q99665 862 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 ACE2Q9BYF1 805 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 GBA3Q9H227 469 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 NEUROG2Q9H2A3 272 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 ETNK1Q9HBU6 452 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 SHOC2Q9UQ13 582 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 NEUROG3Q9Y4Z2 214 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 ASPMQ8IZT6 3477 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 GOLGA6CA6NDK9 693 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 GOLGA6BA6NDN3 693 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 UPK3BL1B0FP48 263 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 UPK3BL2E5RIL1 263 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 F5H423 210 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 KLF8O95600 359 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 APRTP07741 180 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 GOLGA6DP0CG33 693 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 ADH5P11766 374 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 PSMB4P28070 264 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 EIF2DP41214 584 aaKnown RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 PTGER3P43115 390 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 KIR2DL1P43626 348 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 TNNT3P45378 269 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 MMP13P45452 471 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 GAD2Q05329 585 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 ITKQ08881 620 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms