RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ADAMTS15Q8TE58 950 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 COPS5Q92905 334 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 SLC5A5Q92911 643 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 LPPQ93052 612 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ZBTB45Q96K62 511 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 HIST1H2AAQ96QV6 131 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 SLC38A3Q99624 504 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ZFP14Q9HCL3 533 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PDP2Q9P2J9 529 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ZNF214Q9UL59 606 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 BTBD3Q9Y2F9 522 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ANKRD6Q9Y2G4 727 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PCDHGA3Q9Y5H0 932 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 IRAK3Q9Y616 596 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 MYO9BQ13459 2157 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 KDM5AP29375 1690 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 XKRYO14609 159 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 KERAO60938 352 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PLGP00747 810 aaPredicted RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 CTPS1P17812 591 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 LPOP22079 712 aaPredicted RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 UBA1P22314 1058 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 KCNA5P22460 613 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 ACADLP28330 430 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 DNASE1L1P49184 302 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 GCNT1Q02742 428 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 KPNB1Q14974 876 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 MAPKAPK3Q16644 382 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PUS10Q3MIT2 529 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 CERCAMQ5T4B2 595 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ATXN7L2Q5T6C5 722 aaPredicted RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 SDHAF4Q5VUM1 108 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 OLFML2AQ68BL7 652 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ULK3Q6PHR2 472 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 CYP2R1Q6VVX0 501 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ADAMTSL2Q86TH1 951 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 RIOX2Q8IUF8 465 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ADHFE1Q8IWW8 467 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 TC2NQ8N9U0 490 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 TSPAN14Q8NG11 270 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 FBXO30Q8TB52 745 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 UBASH3BQ8TF42 649 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PMEPA1Q969W9 287 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 VCPIP1Q96JH7 1222 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 DHRS1Q96LJ7 313 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 MCMBPQ9BTE3 642 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 FNDC11Q9BVV2 318 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 POMKQ9H5K3 350 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 GMEB2Q9UKD1 530 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ADAM28Q9UKQ2 775 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 AGO1Q9UL18 857 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 PDE9AO76083 593 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 BCL10O95999 233 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 SERPINA1P01009 418 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PIRTP0C851 137 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ELNP15502 786 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 SLC1A6P48664 564 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 RAB25P57735 213 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ITGA7Q13683 1181 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 MEA1Q16626 185 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PCID2Q5JVF3 399 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 SAMD4BQ5PRF9 694 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 AFTPHQ6ULP2 937 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 GPR142Q7Z601 462 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PIGZQ86VD9 579 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 SRFBP1Q8NEF9 429 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 MYLPFQ96A32 169 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 C18orf25Q96B23 403 aaPredicted RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 ZHX1-C8orf76Q96EF9 292 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 MCRS1Q96EZ8 462 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 SPATA9Q9BWV2 254 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 RTFDC1Q9BY42 306 aaPredicted RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 IL22Q9GZX6 179 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 OSGEPQ9NPF4 335 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 DDX18Q9NVP1 670 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 FZD1Q9UP38 647 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 RWDD3Q9Y3V2 267 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ZNF609O15014 1411 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 CFAP43Q8NDM7 1665 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 TRIM64A6NGJ6 449 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 H3BM21 787 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 FCHO1O14526 889 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 TMCC2O75069 709 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 CLPTM1O96005 669 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 IFNGP01579 166 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 VIL1P09327 827 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 MAPTP10636 758 aaKnown RBP7.24□□□□□ -1.25
UPF2-203ENST00000397053 ITGA2P17301 1181 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ALOX12P18054 663 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ELP6Q0PNE2 266 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 EPS8Q12929 822 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 MYBPC3Q14896 1274 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 ACAP1Q15027 740 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PARP6Q2NL67 630 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 LYPLAL1Q5VWZ2 237 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 TRIM40Q6P9F5 258 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 DHRSXQ8N5I4 330 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 HEXDCQ8WVB3 486 aa7.24□□□□□ -1.25
UPF2-203ENST00000397053 PPP3R2Q96LZ3 170 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms