RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FBXW11Q9UKB1 542 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 TLK1Q9UKI8 766 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 MEIS3P2A8K0S8 358 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 H3BRB1 525 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 CACNG3O60359 315 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 LRIG2O94898 1065 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 CLIC3O95833 236 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 ALDOCP09972 364 aaKnown RBP14.06□□□□□ -0.16
NUP98-204ENST00000397004 ACADSBP45954 432 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 TTLL4Q14679 1199 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 GRIK4Q16099 956 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 CNTN4Q8IWV2 1026 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 KLHDC8BQ8IXV7 354 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 CANT1Q8WVQ1 401 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 TUT1Q9H6E5 874 aaKnown RBP14.06□□□□□ -0.16
NUP98-204ENST00000397004 FAM95CA0A1B0GW59 222 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 NPR3P17342 541 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 LILRA4P59901 499 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 RAB10P61026 200 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 TNK2Q07912 1038 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 CLEC6AQ6EIG7 209 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 CEP70Q8NHQ1 597 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 SMOQ99835 787 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 TMEM79Q9BSE2 394 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 FAM49AQ9H0Q0 323 aaPredicted RBP14.06□□□□□ -0.16
NUP98-204ENST00000397004 VTI1BQ9UEU0 232 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 PADI4Q9UM07 663 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 ACOT9Q9Y305 439 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 ARHGEF37A1IGU5 675 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 NCAM1P13591 858 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 DESP17661 470 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 ADSLP30566 484 aaPredicted RBP14.06□□□□□ -0.16
NUP98-204ENST00000397004 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 SLC27A1Q6PCB7 646 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 ITFG2Q969R8 447 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 TMEM181Q9P2C4 612 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 RSL24D1Q9UHA3 163 aaKnown RBP14.06□□□□□ -0.16
NUP98-204ENST00000397004 DERAQ9Y315 318 aa14.06□□□□□ -0.16
NUP98-204ENST00000397004 NRCAMQ92823 1304 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 FAM149AA5PLN7 773 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 ADM5C9JUS6 153 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 YBX3P16989 372 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■□□ 15.7
NUP98-204ENST00000397004 ETFBP38117 255 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 TPI1P60174 286 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 PRKCQQ04759 706 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 SCAPQ12770 1279 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 POTEHQ6S545 545 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 DIS3LQ8TF46 1054 aaKnown RBP14.05□□□□□ -0.16
NUP98-204ENST00000397004 CCT7Q99832 543 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 DNAI2Q9GZS0 605 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 UNC93B1Q9H1C4 597 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 CDC14AQ9UNH5 594 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 TDRKHQ9Y2W6 561 aaKnown RBP14.05□□□□□ -0.16
NUP98-204ENST00000397004 ZNF839A8K0R7 811 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 NPY2RP49146 381 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 PGFP49763 221 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 AGKQ53H12 422 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 PKN3Q6P5Z2 889 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 TFAP2CQ92754 450 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 BRD8Q9H0E9 1235 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 CHST12Q9NRB3 414 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 UTP6Q9NYH9 597 aaKnown RBP14.05□□□□□ -0.16
NUP98-204ENST00000397004 ANKRD6Q9Y2G4 727 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 ENTPD1P49961 510 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 CDK9P50750 372 aaKnown RBP14.05□□□□□ -0.16
NUP98-204ENST00000397004 KYAT1Q16773 422 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 CATSPER1Q8NEC5 780 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 STON2Q8WXE9 905 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 SNX25Q9H3E2 840 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 MEAF6Q9HAF1 191 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 IPO11Q9UI26 975 aaKnown RBP14.05□□□□□ -0.16
NUP98-204ENST00000397004 LAMA3Q16787 3333 aa14.05□□□□□ -0.16
NUP98-204ENST00000397004 NYNRINQ9P2P1 1898 aaKnown RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 A0A1B0GTL3 188 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 A8MT66 165 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 ZSCAN9O15535 394 aaPredicted RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 CHRM3P20309 590 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 ADARP55265 1226 aaKnown RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 CDH17Q12864 832 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 UGT3A2Q3SY77 523 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 UBXN11Q5T124 520 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 RNF135Q8IUD6 432 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 FAM47BQ8NA70 645 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 APPL2Q8NEU8 664 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 PPTC7Q8NI37 304 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 COLEC11Q9BWP8 271 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 SMOXQ9NWM0 555 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 OR12D3Q9UGF7 316 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 FAM155AB1AL88 458 aaPredicted RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 DAOAP59103 153 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 PLOD1Q02809 727 aaPredicted RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 KCTD2Q14681 263 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 ARHGAP12Q8IWW6 846 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 ALDH16A1Q8IZ83 802 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms