RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 FAM95CA0A1B0GW59 222 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 EFCAB14O75071 495 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 LYPLA1O75608 230 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ATXN1LP0C7T5 689 aaKnown RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CPA3P15088 417 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 SERPINB3P29508 390 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 PPP3CCP48454 512 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 KCNJ2P63252 427 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ZNF177Q13360 481 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ADGRF1Q5T601 910 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 NEPROQ6NW34 567 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 C2CD4AQ8NCU7 369 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 KCNK4Q9NYG8 393 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ANKRD6Q9Y2G4 727 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 A0A1B0GVM2 712 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 TCAF2A6NFQ2 919 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 SIN3BO75182 1162 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ATP5HO75947 161 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ABL2P42684 1182 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CD151P48509 253 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 SLC1A6P48664 564 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 C16orf59Q7L2K0 433 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CLNKQ7Z7G1 428 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 TCEAL8Q8IYN2 117 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 MAB21L3Q8N8X9 362 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 NMRAL1Q9HBL8 299 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 SEPT3Q9UH03 358 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 FBXO5Q9UKT4 447 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 NUMBLQ9Y6R0 609 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 LOC285095A0A1B0GVY8 99 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 A8MUI8 341 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ITM2AO43736 263 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 RALBP11234 206 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 GLDCP23378 1020 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 GJA8P48165 433 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 PGGT1BP53609 377 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CDK18Q07002 472 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CHST9Q7L1S5 443 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 SKA1Q96BD8 255 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 ELMO2Q96JJ3 720 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 FEM1CQ96JP0 617 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 TASP1Q9H6P5 420 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 FBXO6Q9NRD1 293 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-202ENST00000396033 HAO1Q9UJM8 370 aa12.25□□□□□ -0.45
ITGB1-202ENST00000396033 CARNS1A5YM72 827 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SCAMP3O14828 347 aaKnown RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 TEX28O15482 410 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 HAUS5O94927 633 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 CBX6O95503 412 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SERPINF2P08697 491 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SPATA31D3P0C874 917 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 PPM1AP35813 382 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ITGA9Q13797 1035 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 GALNT3Q14435 633 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SPATA31D4Q6ZUB0 917 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 OR13J1Q8NGT2 312 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 GABPB2Q8TAK5 448 aaPredicted RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 CALML6Q8TD86 181 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 DDX50Q9BQ39 737 aaKnown RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ZNF334Q9HCZ1 680 aaPredicted RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 WBP1LQ9NX94 342 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ILVBLA1L0T0 632 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 KDELR3O43731 214 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 HLA-DPA1P20036 260 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 GRK2P25098 689 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 AQP5P55064 265 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SMAD3P84022 425 aaKnown RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 MSLNQ13421 630 aaPredicted RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SLC12A1Q13621 1099 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SPDYAQ5MJ70 313 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ASRGL1Q7L266 308 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 OTOP2Q7RTS6 562 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 TMEM150AQ86TG1 271 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 HERC6Q8IVU3 1022 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 TMEM199Q8N511 208 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 PPP4R1Q8TF05 950 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 MGME1Q9BQP7 344 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 NOD2Q9HC29 1040 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 DNAJC16Q9Y2G8 782 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ANKRD33BA6NCL7 494 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 FGF1P05230 155 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SLC35E2BP0CK96 405 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 STMN1P16949 149 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 RAB10P61026 200 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ZNF460Q14592 562 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 KIAA0408Q6ZU52 694 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 ITIH5Q86UX2 942 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 MFSD6LQ8IWD5 586 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 BLOC1S5Q8TDH9 187 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 SREK1Q8WXA9 508 aaKnown RBP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 TMEM237Q96Q45 408 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 CYP2S1Q96SQ9 504 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 WWP1Q9H0M0 922 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 MUC3BQ9H195 1237 aa12.24□□□□□ -0.45
ITGB1-202ENST00000396033 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
ITGB1-202ENST00000396033 CHD5Q8TDI0 1954 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms