RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 STAG3L4Q8TBR4 150 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 MRPS31Q92665 395 aaKnown RBP6.62□□□□□ -1.35
BDNF-203ENST00000395978 CENPIQ92674 756 aaPredicted RBP6.62□□□□□ -1.35
BDNF-203ENST00000395978 CLPTM1LQ96KA5 538 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 CNDP1Q96KN2 507 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 EBF4Q9BQW3 602 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 APOL5Q9BWW9 433 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 ING2Q9H160 280 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 AGO3Q9H9G7 860 aaKnown RBP6.62□□□□□ -1.35
BDNF-203ENST00000395978 NMRK1Q9NWW6 199 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 KLHL42Q9P2K6 505 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 SNX13Q9Y5W8 968 aa6.62□□□□□ -1.35
BDNF-203ENST00000395978 COL11A2P13942 1736 aaPredicted RBP6.62□□□□□ -1.35
BDNF-203ENST00000395978 KCNU1A8MYU2 1149 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 TK2O00142 265 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ADCY6O43306 1168 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 TPST1O60507 370 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 BEST1O76090 585 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 PIRTP0C851 137 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ELNP15502 786 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ITGALP20701 1170 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FMO4P31512 558 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 IDH3AP50213 366 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 TAS2R39P59534 338 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 MPP1Q00013 466 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ZBTB6Q15916 424 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 HERC6Q8IVU3 1022 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 OR6Y1Q8NGX8 325 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 SLC2A13Q96QE2 648 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 TRMOQ9BU70 441 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 PACSIN3Q9UKS6 424 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 PRPF19Q9UMS4 504 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 FAF1Q9UNN5 650 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 PLA2G4CQ9UP65 541 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FAM50BQ9Y247 325 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 PSAT1Q9Y617 370 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ZBBXA8MT70 800 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 OAS1P00973 400 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 URODP06132 367 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 SOX11P35716 441 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 MRPS22P82650 360 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 DUSP4Q13115 394 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FRG1Q14331 258 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 PFKFB4Q16877 469 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 SAMD4BQ5PRF9 694 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 WLSQ5T9L3 541 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 RFWD3Q6PCD5 774 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 CTU1Q7Z7A3 348 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 DHDDSQ86SQ9 333 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 DENND6AQ8IWF6 608 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FSTL5Q8N475 847 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 PCDH20Q8N6Y1 951 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 EFCAB3Q8N7B9 438 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ZNF781Q8N8C0 355 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 PTGR2Q8N8N7 351 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 DDI1Q8WTU0 396 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 RCN3Q96D15 328 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 NRBF2Q96F24 287 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.35
BDNF-203ENST00000395978 SUSD3Q96L08 255 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 RTKNQ9BST9 563 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 CASS4Q9NQ75 786 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FAM72CH0Y354 149 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 BTN3A1O00481 513 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 TPD52L2O43399 206 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 PEX11AO75192 247 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 EOMESO95936 686 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 GRK4P32298 578 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 NDST2P52849 883 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ATN1P54259 1190 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 EPHB3P54753 998 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 ZNF33AQ06730 810 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 SMARCB1Q12824 385 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 DYNC1I2Q13409 638 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 NFYCQ13952 458 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 LBRQ14739 615 aaKnown RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 CCDC142Q17RM4 750 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 PARP15Q460N3 678 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 SGO1Q5FBB7 561 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ACSBG2Q5FVE4 666 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FAM72AQ5TYM5 149 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FAM72DQ6L9T8 149 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 FAM72BQ86X60 149 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 IFNL1Q8IU54 200 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 OR52K2Q8NGK3 314 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 DLG3Q92796 817 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 MARK4Q96L34 752 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 LENG8Q96PV6 779 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 CCDC28BQ9BUN5 200 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 ACSS2Q9NR19 701 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 WWOXQ9NZC7 414 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 NDUFA13Q9P0J0 144 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.61□□□□□ -1.35
BDNF-203ENST00000395978 NDUFAF1Q9Y375 327 aa6.61□□□□□ -1.35
BDNF-203ENST00000395978 CFAP99D6REC4 459 aa6.6□□□□□ -1.35
BDNF-203ENST00000395978 PTGESO14684 152 aa6.6□□□□□ -1.35
BDNF-203ENST00000395978 ITM2AO43736 263 aa6.6□□□□□ -1.35
BDNF-203ENST00000395978 PQBP1O60828 265 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms