RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 RFPL1O75677 317 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 CNTN5O94779 1100 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 ALADP13716 330 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 ARSAP15289 507 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 SGSHP51688 502 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 YBEYP58557 167 aaPredicted RBP15.3■□□□□ 0.04
SCAF11-204ENST00000395454 RPS24P62847 133 aaKnown RBP15.3■□□□□ 0.04
SCAF11-204ENST00000395454 CDH17Q12864 832 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 PDGFRLQ15198 375 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 PARP15Q460N3 678 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 CASC4Q6P4E1 433 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 SRLQ86TD4 932 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 TMEM25Q86YD3 366 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 SLC44A3Q8N4M1 653 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 CDKL2Q92772 493 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 TMA16Q96EY4 203 aaKnown RBP15.3■□□□□ 0.04
SCAF11-204ENST00000395454 VPS11Q9H270 941 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 SPHK2Q9NRA0 654 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 GTSE1Q9NYZ3 720 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 SOX13Q9UN79 622 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 FAM169AQ9Y6X4 670 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 MYLKQ15746 1914 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 UGT1A9O60656 530 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 NFATC1O95644 943 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 CYBBP04839 570 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 HLA-DQB2P05538 268 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 VIMP08670 466 aaKnown RBP15.29■□□□□ 0.04
SCAF11-204ENST00000395454 MGAT5Q09328 741 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 OLIG2Q13516 323 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 RABGAP1LQ5R372 815 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 CIR1Q86X95 450 aaPredicted RBP15.29■□□□□ 0.04
SCAF11-204ENST00000395454 GDAP1Q8TB36 358 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 IRF7Q92985 503 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 HMCESQ96FZ2 354 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 CERS2Q96G23 380 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 KIFC1Q9BW19 673 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 BBS2Q9BXC9 721 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 UGT1A7Q9HAW7 530 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 UGT1A10Q9HAW8 530 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 UGT1A8Q9HAW9 530 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 MIA3Q5JRA6 1907 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 NEDD8-MDP1E9PL57 170 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 TBL1XO60907 577 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 USP12O75317 370 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 BMP1P13497 986 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 GEMP55040 296 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 DHCR24Q15392 516 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 DENND5AQ6IQ26 1287 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 TTC8Q8TAM2 541 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 ACMSDQ8TDX5 336 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 PTCD2Q8WV60 388 aaKnown RBP15.29■□□□□ 0.04
SCAF11-204ENST00000395454 ISL2Q96A47 359 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 GRAMD1AQ96CP6 724 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 SLC25A51Q9H1U9 297 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 HPS4Q9NQG7 708 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 FGFR1OP2Q9NVK5 253 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 PIH1D1Q9NWS0 290 aaKnown RBP15.29■□□□□ 0.04
SCAF11-204ENST00000395454 RPS6KL1Q9Y6S9 549 aa15.29■□□□□ 0.04
SCAF11-204ENST00000395454 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
SCAF11-204ENST00000395454 OTOL1A6NHN0 477 aaPredicted RBP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 ADH1CP00326 375 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 CYP17A1P05093 508 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 PYGBP11216 843 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 RENBPP51606 427 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 RUNX3Q13761 415 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 ANKRD20A4Q4UJ75 823 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 LVRNQ6Q4G3 990 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 PACS1Q6VY07 963 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 TFAP2DQ7Z6R9 452 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 HJURPQ8NCD3 748 aaPredicted RBP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 CCDC197Q8NCU1 140 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 IMP4Q96G21 291 aaKnown RBP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 FCRL3Q96P31 734 aaPredicted RBP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 MCMBPQ9BTE3 642 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 ARNT2Q9HBZ2 717 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 MRM3Q9HC36 420 aaKnown RBP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
SCAF11-204ENST00000395454 RBM22Q9NW64 420 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAF11-204ENST00000395454 TYRP14679 529 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 ADRA1DP25100 572 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 IL10RBQ08334 325 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 MPP3Q13368 585 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 SERINC3Q13530 473 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 HHATQ5VTY9 493 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 FYB2Q5VWT5 728 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 RANBP10Q6VN20 620 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 CPA6Q8N4T0 437 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 DNAAF3Q8N9W5 541 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 TBL1YQ9BQ87 522 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 VPS45Q9NRW7 570 aa15.27■□□□□ 0.04
SCAF11-204ENST00000395454 RRP15Q9Y3B9 282 aaKnown RBP15.27■□□□□ 0.04
SCAF11-204ENST00000395454 ARNTLO00327 626 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms