RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 M0QZQ0 153 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 PLIN3O60664 434 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 MAFKO60675 156 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 ATP6V1G2O95670 118 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 CCNCP24863 283 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 NUDT2P50583 147 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 PFKFB4Q16877 469 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 DDX53Q86TM3 631 aaKnown RBP16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 HEATR9A2RTY3 570 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 PROCP04070 461 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 SERPINE1P05121 402 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 PPM1FP49593 454 aaPredicted RBP16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 TMEM198Q66K66 360 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 ACAD11Q709F0 780 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 FRA10AC1Q70Z53 315 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 DENND1AQ8TEH3 1009 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 SLC22A17Q8WUG5 538 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 RBBP8Q99708 897 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 COPG2Q9UBF2 871 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 TLR6Q9Y2C9 796 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 SH3BGRLO75368 114 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 TFEBP19484 476 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 GPR17Q13304 367 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 DSC3Q14574 896 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 LHX8Q68G74 356 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 RSRC1Q96IZ7 334 aaKnown RBP16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 PIF1Q9H611 641 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 PCDHB12Q9Y5F1 795 aa16.04■□□□□ 0.16
SMARCD1-202ENST00000394963 CFAP73A6NFT4 308 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 SYN3O14994 580 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 SNX2O60749 519 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 SCNN1AP37088 669 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 GNA12Q03113 381 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 COL9A2Q14055 689 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 TEDDM1Q5T9Z0 273 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 FSTL5Q8N475 847 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 TSPAN18Q96SJ8 248 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 EVLQ9UI08 416 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 PSMD3O43242 534 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 ACSL4O60488 711 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 KATNA1O75449 491 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 RHOQP17081 205 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 RECQLP46063 649 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 RCN1Q15293 331 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 PTRHD1Q6GMV3 140 aaKnown RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 RAB44Q7Z6P3 723 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 HAPLN3Q96S86 360 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 ZDHHC4Q9NPG8 344 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 CFAP97Q9P2B7 532 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 V9GYQ6 96 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 COCHO43405 550 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 PRKCHP24723 683 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 KPNB1Q14974 876 aaKnown RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 SPDYAQ5MJ70 313 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 RELL1Q8IUW5 271 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 HS6ST3Q8IZP7 471 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 MYEOVQ96EZ4 313 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 OSBPL1AQ9BXW6 950 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 C20orf27Q9GZN8 174 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 FAM124BQ9H5Z6 455 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 PFDN4Q9NQP4 134 aa16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 OLA1Q9NTK5 396 aaKnown RBP16.03■□□□□ 0.16
SMARCD1-202ENST00000394963 MAGEB16A2A368 324 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 K7ERQ8 282 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 AXIN1O15169 862 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 CRHR1P34998 444 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 PKNOX1P55347 436 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 ABCE1P61221 599 aaKnown RBP16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 MRNIPQ6NTE8 343 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 DET1Q7L5Y6 550 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 UBE2OQ9C0C9 1292 aaKnown RBP16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 AGO1Q9UL18 857 aaKnown RBP16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 SCML2Q9UQR0 700 aa16.02■□□□□ 0.16
SMARCD1-202ENST00000394963 PARP14Q460N5 1801 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 C2orf81A6NN90 581 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 ALPIP09923 528 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 MLNP12872 115 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 ARSDP51689 593 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 LIMK2P53671 638 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 NIPAL4Q0D2K0 466 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 PTPRNQ16849 979 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 ARL13AQ5H913 290 aaPredicted RBP16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 PM20D1Q6GTS8 502 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 C10orf82Q8WW14 230 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 SLC22A12Q96S37 553 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 GATA5Q9BWX5 397 aaPredicted RBP16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 IGFLR1Q9H665 355 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 CD274Q9NZQ7 290 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 CCDC167Q9P0B6 97 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 USP3Q9Y6I4 520 aa16.02■□□□□ 0.15
SMARCD1-202ENST00000394963 IQCF5A8MTL0 148 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 ANP32DO95626 131 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 BNIP1Q12981 228 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 RBBP7Q16576 425 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 GRAMD1BQ3KR37 738 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 SEL1L3Q68CR1 1132 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 CLEC6AQ6EIG7 209 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 FAM151BQ6UXP7 276 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms