RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 NPAS2Q99743 824 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 HOPXQ9BPY8 73 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ANKRD60Q9BZ19 345 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 CLK4Q9HAZ1 481 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TXNRD2Q9NNW7 524 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ARMC1Q9NVT9 282 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ARHGEF38Q9NXL2 777 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 CACNA2D2Q9NY47 1150 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 FNIP2Q9P278 1114 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 MTF2Q9Y483 593 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 A0A087WXM4 84 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 A0A1B0GVG6 124 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 AQP12BA6NM10 295 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM72CH0Y354 149 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 GABRDO14764 452 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 MRASO14807 208 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SPTLC1O15269 473 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 HNRNPRO43390 633 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 PFDN1O60925 122 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CLASP2O75122 1294 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 GPR32O75388 356 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FCGR1AP12314 374 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CPB1P15086 417 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TPH1P17752 444 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CDH2P19022 906 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 AVPR1AP37288 418 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 ABCG1P45844 678 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 NAA20P61599 178 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 PITX1P78337 314 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 PFKPQ01813 784 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 LRP8Q14114 963 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 Q3C1V9 767 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 ZNF792Q3KQV3 632 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 RAB41Q5JT25 222 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM72AQ5TYM5 149 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM72DQ6L9T8 149 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CARM1Q86X55 608 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM72BQ86X60 149 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 DHFR2Q86XF0 187 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CAMK1DQ8IU85 385 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 AQP12AQ8IXF9 295 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SPPL2BQ8TCT7 592 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 RNF34Q969K3 372 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 GPR78Q96P69 363 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 APOL2Q9BQE5 337 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TMEM79Q9BSE2 394 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FSD1LQ9BXM9 530 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TKTL2Q9H0I9 626 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 GLOD4Q9HC38 313 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SPON1Q9HCB6 807 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 MAGED2Q9UNF1 606 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 PIN4Q9Y237 131 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 GINS2Q9Y248 185 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 NDUFAF1Q9Y375 327 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SBF1O95248 1867 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 KCNU1A8MYU2 1149 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 H3BNH8 94 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 NRP2O60462 931 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 BMP2P12643 396 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 IL10P22301 178 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 DPP6P42658 865 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 ALDH3B2P48448 385 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SULT2A1Q06520 285 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 AGKQ53H12 422 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TECRLQ5HYJ1 363 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 BRMS1LQ5PSV4 323 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 INTS11Q5TA45 600 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TMEM198Q66K66 360 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 MAMDC4Q6UXC1 1216 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 GK5Q6ZS86 529 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM35AQ86V20 835 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 HERC6Q8IVU3 1022 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 LRRC43Q8N309 656 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 NPWQ8N729 165 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 OR6J1Q8NGC5 347 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 OR2T34Q8NGX1 318 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 OR2T3Q8NH03 318 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 DIS3LQ8TF46 1054 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 LPGAT1Q92604 370 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 ATP6V1E2Q96A05 226 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SMARCD1Q96GM5 515 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 RANBP9Q96S59 729 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TCF12Q99081 682 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 IL12RB2Q99665 862 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM49AQ9H0Q0 323 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TMPRSS4Q9NRS4 437 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 TMEM181Q9P2C4 612 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 PACSIN3Q9UKS6 424 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 FBXO5Q9UKT4 447 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CDH9Q9ULB4 789 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 SNX13Q9Y5W8 968 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 CEPT1Q9Y6K0 416 aa10.13□□□□□ -0.79
UBE2D3-208ENST00000394803 KANSL1LA0AUZ9 987 aa10.12□□□□□ -0.79
UBE2D3-208ENST00000394803 MATN3O15232 486 aa10.12□□□□□ -0.79
UBE2D3-208ENST00000394803 HCRTO43612 131 aa10.12□□□□□ -0.79
UBE2D3-208ENST00000394803 PGK1P00558 417 aa10.12□□□□□ -0.79
UBE2D3-208ENST00000394803 AKAP5P24588 427 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms