RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 LRIG2O94898 1065 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 USP17L7P0C7H9 530 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 DNAJB1P25685 340 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 APOFQ13790 326 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 MYLK3Q32MK0 819 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 USP41Q3LFD5 358 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 ARL13BQ3SXY8 428 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 PABPC1LQ4VXU2 614 aaKnown RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 SH2D4BQ5SQS7 431 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 PELI3Q8N2H9 469 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 TXNDC5Q8NBS9 432 aaKnown RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 ZMIZ2Q8NF64 920 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 B4GALNT2Q8NHY0 566 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 ZNF296Q8WUU4 475 aaPredicted RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 PRPF18Q99633 342 aaKnown RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 FTHL17Q9BXU8 183 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 SLC2A11Q9BYW1 496 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 OR12D3Q9UGF7 316 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 RRN3P2A6NIE6 340 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 GABRDO14764 452 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 CACNG3O60359 315 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ADAMTS4O75173 837 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ASLP04424 464 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 FAM58BPP0C7Q3 252 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 HSPA1AP0DMV8 641 aaKnown RBP18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 HSPA1BP0DMV9 641 aaKnown RBP18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 HSPA13P48723 471 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 PTK2BQ14289 1009 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 POU6F1Q14863 301 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 PCID2Q5JVF3 399 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 IL23RQ5VWK5 629 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 B3GNT6Q6ZMB0 384 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 SGF29Q96ES7 293 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 HIC2Q96JB3 615 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 TKTL2Q9H0I9 626 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 AK5Q9Y6K8 562 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 STMN1P16949 149 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 DNAJB2P25686 324 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ARNTP27540 789 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 AXLP30530 894 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 CREB5Q02930 508 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 UGP2Q16851 508 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ESRP1Q6NXG1 681 aaKnown RBP18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 CNSTQ6PJW8 725 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 PAOXQ6QHF9 649 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ARHGAP36Q6ZRI8 547 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 BHLHA9Q7RTU4 235 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 PCDH20Q8N6Y1 951 aaKnown RBP18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ZFP28Q8NHY6 868 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 HMGCLL1Q8TB92 370 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 EDEM1Q92611 657 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ATP6V1E2Q96A05 226 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 TBL1YQ9BQ87 522 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 OSBPL2Q9H1P3 480 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 CNGB3Q9NQW8 809 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ADA2Q9NZK5 511 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 ATXN10Q9UBB4 475 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 CACNG4Q9UBN1 327 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 PCDHGA7Q9Y5G6 932 aa18.53■□□□□ 0.56
PCDHA1-202ENST00000394633 TRPC5OSA6NMA1 111 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 PDLIM1O00151 329 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 PSMD3O43242 534 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 MT-CYBP00156 380 aaPredicted RBP18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 ARSAP15289 507 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 ARCN1P48444 511 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 PSME3P61289 254 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 CDC42EP1Q00587 391 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 PCBP1Q15365 356 aaKnown RBP eCLIP18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 MGAT5BQ3V5L5 792 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 CEP70Q8NHQ1 597 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 TSGA13Q96PP4 275 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 SENP6Q9GZR1 1112 aaPredicted RBP18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 MRPL46Q9H2W6 279 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 POMKQ9H5K3 350 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 WDCPQ9H6R7 721 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 GTSE1Q9NYZ3 720 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 IPPQ9Y573 584 aa18.52■□□□□ 0.56
PCDHA1-202ENST00000394633 ZNF26P17031 533 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 POLD2P49005 469 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 CXCR3P49682 368 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 TAS2R39P59534 338 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SNX17Q15036 470 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 RAB41Q5JT25 222 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 FAM35AQ86V20 835 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SPNS2Q8IVW8 549 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 DNAJB3Q8WWF6 145 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 ASB9Q96DX5 294 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF419Q96HQ0 510 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 DNAJC1Q96KC8 554 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 UTP6Q9NYH9 597 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SLC2A6Q9UGQ3 507 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SMIM35A0A1B0GVV1 85 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 NEMP2A6NFY4 417 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 CCDC160A6NGH7 325 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 E7ENX8 843 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 HNRNPLP14866 589 aaKnown RBP eCLIP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 LRPAP1P30533 357 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SLC1A2P43004 574 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms