RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 UBP1Q9NZI7 540 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 SPATA7Q9P0W8 599 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 ANKRD12Q6UB98 2062 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 A0A096LPK6 155 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 NR4A1P22736 598 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 SPRP35270 261 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-204ENST00000394601 CDKL1Q00532 357 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 SEPT6Q14141 434 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 FSCN1Q16658 493 aaKnown RBP15.7■□□□□ 0.1
PTBP1-204ENST00000394601 MYLPFQ96A32 169 aa15.7■□□□□ 0.1
PTBP1-204ENST00000394601 GOLGA8TH3BQL2 631 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CCNT2O60583 730 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 THP07101 528 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 HOXC13P31276 330 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 ARCN1P48444 511 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 FKBP1BP68106 108 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 RARS2Q5T160 578 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 DCLRE1AQ6PJP8 1040 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 MRPL10Q7Z7H8 261 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 NAT16Q8N8M0 369 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 SMYD1Q8NB12 490 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 SMARCD1Q96GM5 515 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CELF6Q96J87 481 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 TMEM209Q96SK2 561 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CDRT15Q96T59 188 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 GPR22Q99680 433 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 WDCPQ9H6R7 721 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 AGO3Q9H9G7 860 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 SLC38A7Q9NVC3 462 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 OXSMQ9NWU1 459 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 BFARQ9NZS9 450 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 MGEA5O60502 916 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 MPOP05164 745 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 GLDCP23378 1020 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CTGFP29279 349 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 NPY2RP49146 381 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 SCNN1GP51170 649 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 EMP3P54852 163 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 PPM1LQ5SGD2 360 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 ZC3HC1Q86WB0 502 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CNTN4Q8IWV2 1026 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 FNDC8Q8TC99 324 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 VPS39Q96JC1 886 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 GPR78Q96P69 363 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 IL22Q9GZX6 179 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CDH19Q9H159 772 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 TRPV6Q9H1D0 765 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 NDFIP2Q9NV92 336 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 MAGEB16A2A368 324 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 MYL4P12829 197 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 ADRA1AP35348 466 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 GRM3Q14832 879 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 GDF6Q6KF10 455 aaPredicted RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 CENPLQ8N0S6 344 aaPredicted RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 OR10T2Q8NGX3 314 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 SPATA22Q8NHS9 363 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 DQX1Q8TE96 717 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 IRGQQ8WZA9 623 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 VAT1Q99536 393 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 NDEL1Q9GZM8 345 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 OSBPL2Q9H1P3 480 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 GPAMQ9HCL2 828 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 EBF1Q9UH73 591 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 RSL24D1Q9UHA3 163 aaKnown RBP15.69■□□□□ 0.1
PTBP1-204ENST00000394601 DMTF1Q9Y222 760 aa15.69■□□□□ 0.1
PTBP1-204ENST00000394601 MYO16Q9Y6X6 1858 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 CASTOR2A6NHX0 329 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 FBP2O00757 339 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 ATP9BO43861 1147 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 KLHL2O95198 593 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 TNFAIP8O95379 198 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 JCHAINP01591 159 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 CYP11A1P05108 521 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 GSTT2P0CG29 244 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 GSTT2BP0CG30 244 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 CCR10P46092 362 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 OXCT1P55809 520 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 PDPK2PQ6A1A2 396 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 CHST15Q7LFX5 561 aaPredicted RBP15.68■□□□□ 0.1
PTBP1-204ENST00000394601 SNX31Q8N9S9 440 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 TSPAN14Q8NG11 270 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 ACTRT2Q8TDY3 377 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 FERMT1Q9BQL6 677 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 UNKQ9C0B0 810 aaKnown RBP15.68■□□□□ 0.1
PTBP1-204ENST00000394601 ZNF385DQ9H6B1 395 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 IARS2Q9NSE4 1012 aaKnown RBP15.68■□□□□ 0.1
PTBP1-204ENST00000394601 DNAJB4Q9UDY4 337 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 GMEB1Q9Y692 573 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 DOCK4Q8N1I0 1966 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 TMEM247A6NEH6 219 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 MAFKO60675 156 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 SLC35E2BP0CK96 405 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 ITGAXP20702 1163 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 ZNF33AQ06730 810 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 AFMIDQ63HM1 303 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 TAF2Q6P1X5 1199 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 CYP2R1Q6VVX0 501 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 PQLC1Q8N2U9 271 aa15.68■□□□□ 0.1
PTBP1-204ENST00000394601 SCAMP5Q8TAC9 235 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms