RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TBXAS1P24557 533 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 MPSTP25325 297 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 LTKP29376 864 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CAPGP40121 348 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 HAAOP46952 286 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 TAP1Q03518 808 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 DGCR6Q14129 220 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PRR16Q569H4 304 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 OTUD3Q5T2D3 398 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SPOCD1Q6ZMY3 1216 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 AGMOQ6ZNB7 445 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CDH24Q86UP0 819 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 DDIASQ8IXT1 998 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 RHOXF1Q8NHV9 184 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 RP9Q8TA86 221 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CEP170P1Q96L14 293 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 C1orf74Q96LT6 269 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 UCK2Q9BZX2 261 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ZC3H7BQ9UGR2 993 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF652Q9Y2D9 606 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ROBO3Q96MS0 1386 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 A0A0B4J203 849 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ISPDA4D126 451 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 OR5K4A6NMS3 321 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TFECO14948 347 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 PSTPIP1O43586 416 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 C1QAP02745 245 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 JUNP05412 331 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ATP6V1B2P21281 511 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 GLDCP23378 1020 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 GYG1P46976 350 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 GABRB2P47870 512 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 CABP4P57796 275 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 RPL7AP62424 266 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 DGUOKQ16854 277 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 LGSNQ5TDP6 509 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 FIP1L1Q6UN15 594 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 CCDC185Q8N715 623 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 MFSD2AQ8NA29 543 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 GALNT11Q8NCW6 608 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 POMGNT1Q8WZA1 660 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 FBXW5Q969U6 566 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 PBXIP1Q96AQ6 731 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 KATNAL1Q9BW62 490 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ADAMTS10Q9H324 1103 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 FANCFQ9NPI8 374 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TMEM39AQ9NV64 488 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 EGFL7Q9UHF1 273 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TEX264Q9Y6I9 313 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TOPAZ1Q8N9V7 1692 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 UBE4BO95155 1302 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 CIB4A0PJX0 185 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 I3L521 148 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 AREL1O15033 823 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TLR3O15455 904 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 AKR7A2O43488 359 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 FAM13AO94988 1023 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 PHKG2P15735 406 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ALAS2P22557 587 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 SIK1P57059 783 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 GPR85P60893 370 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TARDBPQ13148 414 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 DPY19L1Q2PZI1 675 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF544Q6NX49 715 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 LURAP1LQ8IV03 231 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 NSUN6Q8TEA1 469 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 PCNPQ8WW12 178 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 SEMA4DQ92854 862 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ROGDIQ9GZN7 287 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TNKS2Q9H2K2 1166 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 ACOXLQ9NUZ1 547 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 NUP50Q9UKX7 468 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 RIMKLBQ9ULI2 386 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-203ENST00000394573 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 TCAF2A6NFQ2 919 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PLIN3O60664 434 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 CD83Q01151 205 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms