RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GOLGA6CA6NDK9 693 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 ZNF217O75362 1048 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 ECEL1O95672 775 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 AP2A1O95782 977 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PDGFBP01127 241 aaPredicted RBP13.4□□□□□ -0.26
USP44-202ENST00000393091 EPHX1P07099 455 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 GOLGA6DP0CG33 693 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 MLNP12872 115 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 AVPR2P30518 371 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 NUDT1P36639 197 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 CXCL12P48061 93 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 CCDC15Q0P6D6 951 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 CST6Q15828 149 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PCGF5Q86SE9 256 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 NLRP8Q86W28 1048 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PIH1D2Q8WWB5 315 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 RANBP9Q96S59 729 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 NT5MQ9NPB1 228 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 KCNK1O00180 336 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PLRG1O43660 514 aaKnown RBP13.4□□□□□ -0.26
USP44-202ENST00000393091 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
USP44-202ENST00000393091 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
USP44-202ENST00000393091 GAS8O95995 478 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 SERPINF2P08697 491 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 SERPINA4P29622 427 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 DRD3P35462 400 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 DNA2P51530 1060 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 NRLP54845 237 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 MAATS1Q7Z4T9 603 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 MRGPRX2Q96LB1 330 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 LRRC40Q9H9A6 602 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PLXNB3Q9ULL4 1909 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 ANTXRLA6NF34 631 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 PSMD11O00231 422 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 AREL1O15033 823 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 SPINT1O43278 529 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
USP44-202ENST00000393091 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
USP44-202ENST00000393091 ATXN1LP0C7T5 689 aaKnown RBP13.39□□□□□ -0.27
USP44-202ENST00000393091 NFKB1P19838 968 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 PIP5KL1Q5T9C9 394 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 C1orf210Q8IVY1 113 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 NETO2Q8NC67 525 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 CHST14Q8NCH0 376 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
USP44-202ENST00000393091 SEMA3CQ99985 751 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 PREBQ9HCU5 417 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 UNC80Q8N2C7 3258 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 TP73O15350 636 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 NDUFV2P19404 249 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 RECQLP46063 649 aaPredicted RBP13.39□□□□□ -0.27
USP44-202ENST00000393091 PRPSAP1Q14558 356 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 DUPD1Q68J44 220 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 DPPA4Q7L190 304 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 PEX13Q92968 403 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 WHRNQ9P202 907 aa13.39□□□□□ -0.27
USP44-202ENST00000393091 RGSL1A5PLK6 1076 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 PPFIA2O75334 1257 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 LEFTY1O75610 366 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 METTL18O95568 372 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 KRT14P02533 472 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 TEAD1P28347 426 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 POLR2LP62875 67 aaKnown RBP13.38□□□□□ -0.27
USP44-202ENST00000393091 DR1Q01658 176 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 DSC2Q02487 901 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 TRAF2Q12933 501 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 AGBL4Q5VU57 503 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 DENND5AQ6IQ26 1287 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 TRIM69Q86WT6 500 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 JAMLQ86YT9 394 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 NAT8LQ8N9F0 302 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 PIP4K2CQ8TBX8 421 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 MRM3Q9HC36 420 aaKnown RBP13.38□□□□□ -0.27
USP44-202ENST00000393091 MAGEE1Q9HCI5 957 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 KCTD5Q9NXV2 234 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 RSPH14Q9UHP6 348 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 SARDHQ9UL12 918 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 HLA-EP13747 358 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 TNFRSF8P28908 595 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 AADATQ8N5Z0 425 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 GLIS1Q8NBF1 620 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 BBOF1Q8ND07 529 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 SGSM3Q96HU1 749 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
USP44-202ENST00000393091 TNKS2Q9H2K2 1166 aa13.38□□□□□ -0.27
USP44-202ENST00000393091 KLHL8Q9P2G9 620 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms