RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 INAVAQ3KP66 663 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 FANK1Q8TC84 345 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 POMGNT1Q8WZA1 660 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 HDAC11Q96DB2 347 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PRMT6Q96LA8 375 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 SEPHS2Q99611 448 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 GON7Q9BXV9 100 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 YTHDF1Q9BYJ9 559 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 UCK2Q9BZX2 261 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PCIF1Q9H4Z3 704 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 USE1Q9NZ43 259 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 EIF3LQ9Y262 564 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CACNA1FO60840 1977 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 A8MUA0 341 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 MUSKO15146 869 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 GSTM1P09488 218 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 GZMAP12544 262 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PTPN1P18031 435 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 RPL10P27635 214 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 GRK3P35626 688 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 GRB10Q13322 594 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PPIL2Q13356 520 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 UGP2Q16851 508 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 AGKQ53H12 422 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 TYW3Q6IPR3 259 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 HHIPL2Q6UWX4 724 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 SULF1Q8IWU6 871 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CHERPQ8IWX8 916 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 UBR7Q8N806 425 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 APBB2Q92870 758 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 STARD7Q9NQZ5 370 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 C1orf112Q9NSG2 853 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHGB4Q9UN71 923 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHGB5Q9Y5G0 923 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 DHRS12A0PJE2 317 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CAPN14A8MX76 684 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 NUPL2O15504 423 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 APOL3O95236 402 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PTTG1O95997 202 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 FOSP01100 380 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 DDCP20711 480 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 ERP29P30040 261 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 HNF4AP41235 474 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 ALDH7A1P49419 539 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PRIM2P49643 509 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 VBP1P61758 197 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PDZK1Q5T2W1 519 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF773Q6PK81 442 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PLET1Q6UQ28 207 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 TMCO6Q96DC7 493 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 NACC1Q96RE7 527 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PPA2Q9H2U2 334 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 NARFLQ9H6Q4 476 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CHMP1AQ9HD42 196 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PNPLA8Q9NP80 782 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 RAB6BQ9NRW1 208 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 TAS2R9Q9NYW1 312 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 KANSL3Q9P2N6 904 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 DCDC2Q9UHG0 476 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CNOT11Q9UKZ1 510 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 COG5Q9UP83 839 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 TPRKBQ9Y3C4 175 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CSADQ9Y600 493 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 RAD54BQ9Y620 910 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 RGPD5Q99666 1765 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 SDR42E2A6NKP2 422 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TMX2-CTNND1H3BSU7 103 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 H7C2Y5 167 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 DFFAO00273 331 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF254O75437 659 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 AKAP3O75969 853 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 APRTP07741 180 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 C4BPBP20851 252 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 GLDCP23378 1020 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 GTF2E2P29084 291 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 IDUAP35475 653 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 CASP4P49662 377 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 YWHAHQ04917 246 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF543Q08ER8 600 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SELPLGQ14242 412 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TAB1Q15750 504 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF181Q2M3W8 571 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ODR4Q5SWX8 454 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ATAD3CQ5T2N8 411 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 DNAJC24Q6P3W2 148 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NOXA1Q86UR1 476 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ERO1BQ86YB8 467 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 STX19Q8N4C7 294 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NAT16Q8N8M0 369 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 DEDD2Q8WXF8 326 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ATXN7L3BQ96GX2 97 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TMEM39BQ9GZU3 492 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 KCNK13Q9HB14 408 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TIGARQ9NQ88 270 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 IL17RBQ9NRM6 502 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 GLTPQ9NZD2 209 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms