RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 GALNT18Q6P9A2 607 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 RFWD3Q6PCD5 774 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 NT5DC4Q86YG4 428 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 NT5MQ9NPB1 228 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 DDX43Q9NXZ2 648 aaKnown RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF221Q9UK13 617 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 RPS6KA6Q9UK32 745 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 POMPQ9Y244 141 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 TBC1D30Q9Y2I9 924 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 LTBP3Q9NS15 1303 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 MTA2O94776 668 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 H6PDO95479 791 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 FOXN2P32314 431 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 PIK3CGP48736 1102 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 ASTE1Q2TB18 679 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 DNAJC14Q6Y2X3 702 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 MINDY2Q8NBR6 621 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 MAGEL2Q9UJ55 1249 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 ING4Q9UNL4 249 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 FZD1Q9UP38 647 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 NUP62P37198 522 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 HARS2P49590 506 aaKnown RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 PSEN1P49768 467 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 TYSND1Q2T9J0 566 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 HM13Q8TCT9 377 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 SENP6Q9GZR1 1112 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 ING3Q9NXR8 418 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 SEC22BO75396 215 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CXCL8P10145 99 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 MZF1P28698 734 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CDK9P50750 372 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CDC42P60953 191 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 RAB10P61026 200 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 MZT2AQ6P582 158 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 ZDHHC24Q6UX98 284 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 B3GALNT2Q8NCR0 500 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 OR52K1Q8NGK4 314 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 HGH1Q9BTY7 390 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 EPB41L4BQ9H329 900 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 AKAP12Q02952 1782 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 NRCAMQ92823 1304 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 E5RJQ4 531 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 TIPRLO75663 272 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 ALDH2P05091 517 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 PSMB4P28070 264 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 PRMT2P55345 433 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 RPL7AP62424 266 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 TMEM132BQ14DG7 1078 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 ZACNQ401N2 412 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 PAGE2BQ5JRK9 111 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 MILR1Q7Z6M3 343 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 ADGRF2Q8IZF7 708 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 SMPD3Q9NY59 655 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 UNCXA6NJT0 531 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 USP12O75317 370 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 SERPINF2P08697 491 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 ALDH6A1Q02252 535 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 TDRD10Q5VZ19 366 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 NPNTQ6UXI9 565 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 MOB2Q70IA6 237 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 THAP5Q7Z6K1 395 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 TNS4Q8IZW8 715 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CLYBLQ8N0X4 340 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 RTL3Q8N8U3 475 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 GMEB1Q9Y692 573 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 PSMD10O75832 226 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 IDO1P14902 403 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 IDH2P48735 452 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 JAM2P57087 298 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
SHANK1-203ENST00000391813 PAGE2Q7Z2X7 111 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 PCDHB18PQ96TA0 734 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CARD8Q9Y2G2 431 aa19.84■□□□□ 0.77
SHANK1-203ENST00000391813 CST1P01037 141 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 AMHP03971 560 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 LGALS2P05162 132 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 GSTM1P09488 218 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 PABPC1P11940 636 aaKnown RBP19.83■□□□□ 0.77
SHANK1-203ENST00000391813 CREB1P16220 341 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 SLC5A3P53794 718 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 ITGA7Q13683 1181 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 ADGRE1Q14246 886 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 AMHR2Q16671 573 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF280DQ6N043 979 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 C11orf88Q6PI97 169 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 RNF19BQ6ZMZ0 732 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 RAB2BQ8WUD1 216 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 MYLPFQ96A32 169 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 TBCDQ9BTW9 1192 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 HTATIP2Q9BUP3 242 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 PCDHAC2Q9Y5I4 1007 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 TCRBV7S2A1N4TA0A589 114 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 TISP43B9A030 160 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 TMCC2O75069 709 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 TKTL1P51854 596 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 PCBP1Q15365 356 aaKnown RBP eCLIP19.83■□□□□ 0.77
SHANK1-203ENST00000391813 CDC73Q6P1J9 531 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 DNAJB3Q8WWF6 145 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 SKA1Q96BD8 255 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 KLHL32Q96NJ5 620 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms