RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 TNIP2Q8NFZ5 429 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 NOC3LQ8WTT2 800 aaKnown RBP3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 TRIB2Q92519 343 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 RTP4Q96DX8 246 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 SLC32A1Q9H598 525 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 TMEM160Q9NX00 188 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 NDRG3Q9UGV2 375 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 PROCRQ9UNN8 238 aa3.78□□□□□ -1.8
SNORA40.3-201ENST00000390964 A0A0U1RQJ8 604 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 DYTNA2CJ06 578 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 TYW5A2RUC4 315 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 PABPN1LA6NDY0 278 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 BTBD18B2RXH4 712 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 TEX22C9J3V5 150 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 VNN2O95498 520 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 PCNAP12004 261 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 SRD5A1P18405 259 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 ITGB8P26012 769 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 FMO4P31512 558 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 PGM1P36871 562 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 RPL3P39023 403 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 CXCR3P49682 368 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 TUBA1BP68363 451 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 BNC1Q01954 994 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 CYP4A11Q02928 519 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 DHX8Q14562 1220 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 TAF12Q16514 161 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 C16orf82Q7Z2V1 217 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 RBMXL3Q8N7X1 1067 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 LMO3Q8TAP4 145 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 RUFY2Q8WXA3 655 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 SNAPC3Q92966 411 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 TXNDC15Q96J42 360 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 UBXN10Q96LJ8 280 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 EYA3Q99504 573 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 MMTAG2Q9BU76 263 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 IL25Q9H293 177 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 OR6C3Q9NZP0 311 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 CNOT7Q9UIV1 285 aaKnown RBP3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 PAM16Q9Y3D7 125 aa3.77□□□□□ -1.81
SNORA40.3-201ENST00000390964 LINC01553A4QN01 128 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 GAGE10A6NGK3 116 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 WNT9BO14905 357 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 ZBTB11O95625 1053 aaPredicted RBP3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 PPP1R3DO95685 299 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 TFPIP10646 304 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 SLC2A4P14672 509 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 DAOP14920 347 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 PDLIM4P50479 330 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 NR1H2P55055 460 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 VAMP2P63027 116 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 ZRSR2Q15696 482 aaKnown RBP3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 KIF19Q2TAC6 998 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 TYW3Q6IPR3 259 aaKnown RBP3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 PRSS57Q6UWY2 283 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 CCDC129Q6ZRS4 1044 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 MOB3CQ70IA8 216 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 TBC1D26Q86UD7 250 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 FAM160B2Q86V87 743 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 TMED6Q8WW62 240 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 ELP4Q96EB1 424 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 LRFN5Q96NI6 719 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 FIZ1Q96SL8 496 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 BEX4Q9NWD9 120 aaPredicted RBP3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 BABAM1Q9NWV8 329 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 IL1RAPL1Q9NZN1 696 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 HCN3Q9P1Z3 774 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 PEMTQ9UBM1 199 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 PCDHGB1Q9Y5G3 927 aa3.76□□□□□ -1.81
SNORA40.3-201ENST00000390964 A0A0U1RQF3 1178 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 KLRF2D3W0D1 207 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 TIMM23O14925 209 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 ATP2C2O75185 946 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 EIF3JO75822 258 aaKnown RBP3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 CH25HO95992 272 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 IFIT1P09914 478 aaKnown RBP3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 CLCN5P51795 746 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 GAS1P54826 345 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 RRP1P56182 461 aaKnown RBP3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 ECT2LQ008S8 904 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 BIRC3Q13489 604 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 RUNX2Q13950 521 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 NFIL3Q16649 462 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 IZUMO4Q1ZYL8 232 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 ZNF766Q5HY98 468 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 SERTAD4-AS1Q5TG53 156 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 C9orf57Q5W0N0 161 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 H1FNTQ75WM6 255 aaPredicted RBP3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 ARMC9Q7Z3E5 817 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 TMTC1Q8IUR5 882 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 LURAP1LQ8IV03 231 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 CCDC105Q8IYK2 499 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 C11orf65Q8NCR3 313 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 ZCCHC10Q8TBK6 192 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 MAELQ96JY0 434 aaKnown RBP3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 DUX5Q96PT3 197 aa3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 INTS2Q9H0H0 1204 aaKnown RBP3.75□□□□□ -1.81
SNORA40.3-201ENST00000390964 CYSLTR2Q9NS75 346 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms