RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NSD2O96028 1365 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MYO16Q9Y6X6 1858 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IGHV4-4A0A075B6R2 117 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IGLV5-45A0A087WSX0 123 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TRAV20A0A0B4J274 112 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A1B0GVM2 712 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A1W2PQ72 361 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MEX3AA1L020 520 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PRSS38A1L453 326 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IGKV2-29A2NJV5 120 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MTMR11A4FU01 709 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 VWA3AA6NCI4 1184 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IQCA1LA6NCM1 817 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CBY3A6NI87 242 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM90A20PA6NIJ5 464 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CCDC85CA6NKD9 419 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 C16orf96A6NNT2 1141 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 A8MVJ9 347 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TTC34A8MYJ7 566 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 KDM4EB2RXH2 506 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SHISA9B4DS77 424 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 STMND1H3BQB6 276 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TAF4O00268 1085 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TNPO2O14787 897 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGEB2O15479 319 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 FFAR2O15552 330 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PHGDHO43175 533 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PHF1O43189 567 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RASA4O43374 803 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SYNGR3O43761 229 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF861PO60384 105 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SORBS3O60504 671 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 GALR3O60755 368 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PRAMEF2O60811 474 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 LRCH4O75427 683 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RFPL2O75678 378 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 DNAJC8O75937 253 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 NXPH2O95156 264 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IPO7O95373 1038 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CLDN14O95500 239 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ACTL6AO96019 429 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IGLV1-47P01700 117 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 AMY1AP04745 511 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 GLAP06280 429 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 P4HBP07237 508 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CSF1RP07333 972 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RETP07949 1114 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MMP3P08254 477 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 GNAI3P08754 354 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CTSHP09668 335 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MYZAPP0CAP1 466 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MYF5P13349 255 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 DDCP20711 480 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CDK11BP21127 795 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ACHEP22303 614 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ENPP1P22413 925 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 WARSP23381 471 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ADRA1DP25100 572 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ITGA3P26006 1051 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PTX3P26022 381 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ADORA2AP29274 412 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TIA1P31483 386 aaKnown RBP eCLIP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CHRNA3P32297 505 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC16A2P36021 539 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 NUDT1P36639 197 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RPL3P39023 403 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 OPRD1P41143 372 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 UBA7P41226 1012 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RANGAP1P46060 587 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MASP1P48740 699 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MMP14P50281 582 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TOB1P50616 345 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 DGKQP52824 942 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IST1P53990 364 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 BCAT1P54687 386 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CDH12P55289 794 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF280AP59817 542 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 GNAI1P63096 354 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SUMO1P63165 101 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ATP8B2P98198 1209 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ROR1Q01973 937 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RELQ04864 619 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CCDC15Q0P6D6 951 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF155Q12901 538 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 FLIIQ13045 1269 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PSG7Q13046 419 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 DRP2Q13474 957 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 HNRNPDQ14103 355 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 LY6DQ14210 128 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CTTNQ14247 550 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 KIF22Q14807 665 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 KIR2DS5Q14953 304 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PTGES3Q15185 160 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 E2F5Q15329 346 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMY1FQ15415 496 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 OASLQ15646 514 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 EFNB3Q15768 340 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PRICKLE4Q2TBC4 344 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms