RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 C8AP07357 584 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 GLDCP23378 1020 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 IRX4P78413 519 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 STX3Q13277 289 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 USP10Q14694 798 aaKnown RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 ZNF470Q6ECI4 717 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 GAREM2Q75VX8 874 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 CCDC91Q7Z6B0 441 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 TMC8Q8IU68 726 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 LMNTD2Q8IXW0 634 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 DNAJC5GQ8N7S2 189 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 KREMEN2Q8NCW0 462 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 PPP1R14CQ8TAE6 165 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 LRRC37BQ96QE4 947 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 RAD9AQ99638 391 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 LRRC3Q9BY71 257 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 PCDH10Q9P2E7 1040 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 FBXO5Q9UKT4 447 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 LZTS1Q9Y250 596 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 IRAK3Q9Y616 596 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 CAPN7Q9Y6W3 813 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 GFRA2O00451 464 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 SNNO75324 88 aaPredicted RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 NDST3O95803 873 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 F7P08709 466 aaPredicted RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 PFKLP17858 780 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 CDC25CP30307 473 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 CD151P48509 253 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 SLC7A9P82251 487 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 MPP1Q00013 466 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 OCRLQ01968 901 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 TAF1BQ53T94 588 aaPredicted RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 MICALL1Q8N3F8 863 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 OR13J1Q8NGT2 312 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 SP7Q8TDD2 431 aaPredicted RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 BADQ92934 168 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 TMA16Q96EY4 203 aaKnown RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 GCNAQ96QF7 691 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 THAP1Q9NVV9 213 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 ARIH1Q9Y4X5 557 aaPredicted RBP25.41■■□□□ 1.66
SHOX2-201ENST00000389589 ANKRD36A6QL64 1941 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 ALPK3Q96L96 1907 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 CCDC195A0A1B0GUA6 201 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 INSIG1O15503 277 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 PRKCGP05129 697 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 CR2P20023 1033 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 MBLAC2Q68D91 279 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 PSRC1Q6PGN9 363 aaPredicted RBP25.4■■□□□ 1.66
SHOX2-201ENST00000389589 RAPH1Q70E73 1250 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 GALNT7Q86SF2 657 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 CARNMT1Q8N4J0 409 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 TSNARE1Q96NA8 513 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 COPG2Q9UBF2 871 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 RIMKLBQ9ULI2 386 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 GJB3O75712 270 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 DNAJC8O75937 253 aaPredicted RBP25.4■■□□□ 1.66
SHOX2-201ENST00000389589 LUC7L3O95232 432 aaKnown RBP25.4■■□□□ 1.66
SHOX2-201ENST00000389589 APOA4P06727 396 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 COL6A2P12110 1019 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 NUMBP49757 651 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 CYP4F8P98187 520 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 ILF2Q12905 390 aaKnown RBP25.4■■□□□ 1.66
SHOX2-201ENST00000389589 BNIP1Q12981 228 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 PCLAFQ15004 111 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 CYTH1Q15438 398 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 DLG2Q15700 870 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 RFWD2Q8NHY2 731 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 TRIB3Q96RU7 358 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 NOD2Q9HC29 1040 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 SCUBE2Q9NQ36 999 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 MID2Q9UJV3 735 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 ACTL7AQ9Y615 435 aa25.4■■□□□ 1.66
SHOX2-201ENST00000389589 HELZP42694 1942 aaKnown RBP25.4■■□□□ 1.66
SHOX2-201ENST00000389589 LDB2O43679 373 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 CKMP06732 381 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 ARFIP2P53365 341 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 SLC12A1Q13621 1099 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 TMEM240Q5SV17 173 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 CRLF3Q8IUI8 442 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 HS6ST3Q8IZP7 471 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 PLD6Q8N2A8 252 aaKnown RBP25.39■■□□□ 1.65
SHOX2-201ENST00000389589 ACVR1CQ8NER5 493 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 BRSK1Q8TDC3 778 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 TCF25Q9BQ70 676 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 MFSD1Q9H3U5 465 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 CXXC1Q9P0U4 656 aaPredicted RBP25.39■■□□□ 1.65
SHOX2-201ENST00000389589 DCTN4Q9UJW0 460 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 CHKBQ9Y259 395 aa25.39■■□□□ 1.65
SHOX2-201ENST00000389589 TRAV19A0A0A6YYK7 116 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 FAM95CA0A1B0GW59 222 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 H0YHG0 523 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 CPA3P15088 417 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 GRK2P25098 689 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 CRABP2P29373 138 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 SCNN1BP51168 640 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 ZXDBP98169 803 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 HTR3DQ70Z44 454 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 MAB21L3Q8N8X9 362 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 NUDCD1Q96RS6 583 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms