RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CHST7Q9NS84 486 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TMLHEQ9NVH6 421 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 REV1Q9UBZ9 1251 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 PCDHGC3Q9UN70 934 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 COG5Q9UP83 839 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 AKAP11Q9UKA4 1901 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 KRT87PA6NCN2 255 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ARHGEF9O43307 516 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 HTR7P34969 479 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 STAT1P42224 750 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 YAP1P46937 504 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SNX16P57768 344 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 GTF2IP78347 998 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 GEN1Q17RS7 908 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 PRR16Q569H4 304 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 C16orf46Q6P387 395 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SYCE2Q6PIF2 218 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 BBS12Q6ZW61 710 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 KRT25Q7Z3Z0 450 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CAMK1DQ8IU85 385 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 LACC1Q8IV20 430 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 WDR49Q8IV35 697 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF444Q8N0Y2 327 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CMASQ8NFW8 434 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 OR6P1Q8NGX9 317 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 LNX1Q8TBB1 728 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RSAD2Q8WXG1 361 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 DLG3Q92796 817 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 NKD2Q969F2 451 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 MECRQ9BV79 373 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 APOL5Q9BWW9 433 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RAB34Q9BZG1 259 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 PRDM8Q9NQV8 689 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 IARS2Q9NSE4 1012 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 GCNT4Q9P109 453 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 EIF3KQ9UBQ5 218 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 BAG5Q9UL15 447 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 KIAA1024Q9UPX6 916 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TCAF1Q9Y4C2 921 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 MYH9P35579 1960 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ATP8B3O60423 1300 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 LINC00587B1AMM8 73 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 LAD1O00515 517 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 NUPL2O15504 423 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CFLARO15519 480 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SLC37A4O43826 429 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 BCAS1O75363 584 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CFBP00751 764 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ASS1P00966 412 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CAPNS1P04632 268 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 DHRS4L1P0CG22 281 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF250P15622 560 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 NCF2P19878 526 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TNFAIP3P21580 790 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 EPHX2P34913 555 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RGS7P49802 495 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 NDST1P52848 882 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 AQP6Q13520 282 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 UGP2Q16851 508 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 AOC3Q16853 763 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 KIAA1324Q6UXG2 1013 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CFAP77Q6ZQR2 320 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ADCK1Q86TW2 530 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 FAM124AQ86V42 546 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SYTL1Q8IYJ3 562 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ZSCAN18Q8TBC5 510 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SLCO2A1Q92959 643 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 COA7Q96BR5 231 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RIPOR3Q96MK2 946 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 LRP5O75197 1615 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RGS5O15539 181 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF780AO75290 641 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 COMTP21964 271 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 IL12AP29459 219 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 SCNN1GP51170 649 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PKNOX1P55347 436 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CHI3L2Q15782 390 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 FAM180BQ6P0A1 224 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PPP4R3CPQ6ZMV5 832 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 SYDE1Q6ZW31 735 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 DSELQ8IZU8 1212 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 TDRD5Q8NAT2 981 aaKnown RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 LRTOMTQ8WZ04 291 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ASB2Q96Q27 587 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 UCK2Q9BZX2 261 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 BARHL2Q9NY43 387 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF224Q9NZL3 707 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 AJAP1Q9UKB5 411 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 IRS2Q9Y4H2 1338 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 SLX4Q8IY92 1834 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 FAM155AB1AL88 458 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 H3BMM5 538 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 AIM2O14862 343 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 UPK1BO75841 260 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CDK14O94921 469 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms