RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SLC30A5Q8TAD4 765 aa23.41■■□□□ 1.34
U2AF1-202ENST00000380276 CCDC97Q96F63 343 aaPredicted RBP23.41■■□□□ 1.34
U2AF1-202ENST00000380276 EPAS1Q99814 870 aa23.41■■□□□ 1.34
U2AF1-202ENST00000380276 NCAPGQ9BPX3 1015 aa23.41■■□□□ 1.34
U2AF1-202ENST00000380276 CCDC3Q9BQI4 270 aa23.41■■□□□ 1.34
U2AF1-202ENST00000380276 TAB2Q9NYJ8 693 aa23.41■■□□□ 1.34
U2AF1-202ENST00000380276 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.41■■□□□ 1.34
U2AF1-202ENST00000380276 SIRPGQ9P1W8 387 aa23.41■■□□□ 1.34
U2AF1-202ENST00000380276 A0A1W2PNU3 283 aaPredicted RBP23.4■■□□□ 1.34
U2AF1-202ENST00000380276 PMS2P1A4D2B8 440 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 TCEA3O75764 348 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 ITIH2P19823 946 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 EIF4A3P38919 411 aaKnown RBP23.4■■□□□ 1.34
U2AF1-202ENST00000380276 NRG1Q02297 640 aaPredicted RBP23.4■■□□□ 1.34
U2AF1-202ENST00000380276 LY6DQ14210 128 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 KLHL40Q2TBA0 621 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 ZSCAN23Q3MJ62 389 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 MACC1Q6ZN28 852 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 ARL14Q8N4G2 192 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 CCDC185Q8N715 623 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 FAM172AQ8WUF8 416 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 CENPTQ96BT3 561 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 GRAMD1AQ96CP6 724 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 SLC46A1Q96NT5 459 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 BOCQ9BWV1 1114 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 MBNL1Q9NR56 388 aaKnown RBP23.4■■□□□ 1.34
U2AF1-202ENST00000380276 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
U2AF1-202ENST00000380276 CXorf51AA0A1B0GTR3 108 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 CASC3O15234 703 aaKnown RBP23.39■■□□□ 1.33
U2AF1-202ENST00000380276 YY2O15391 372 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 KDELR3O43731 214 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 LZTS3O60299 673 aaPredicted RBP23.39■■□□□ 1.33
U2AF1-202ENST00000380276 TNFSF15O95150 251 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 CTSEP14091 401 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 TSHRP16473 764 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 YPEL5P62699 121 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 STRADAQ7RTN6 431 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 ZNF677Q86XU0 584 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 WDR36Q8NI36 951 aaKnown RBP23.39■■□□□ 1.33
U2AF1-202ENST00000380276 SELENOOQ9BVL4 669 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 SAMSN1Q9NSI8 373 aaKnown RBP23.39■■□□□ 1.33
U2AF1-202ENST00000380276 PNMA8BQ9ULN7 279 aaPredicted RBP23.39■■□□□ 1.33
U2AF1-202ENST00000380276 PADI4Q9UM07 663 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 COQ6Q9Y2Z9 468 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 PCDHGA8Q9Y5G5 932 aa23.39■■□□□ 1.33
U2AF1-202ENST00000380276 ZSCAN5CA6NGD5 496 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-202ENST00000380276 LMO7DNF2Z398 122 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 J3QKU1 62 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 AREL1O15033 823 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 CELA2BP08218 269 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-202ENST00000380276 MMP8P22894 467 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 ERCC5P28715 1186 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-202ENST00000380276 CDR2Q01850 454 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 IRF4Q15306 451 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 KIAA1614Q5VZ46 1190 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 IGF2-ASQ6U949 168 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 RD3Q7Z3Z2 195 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 HID1Q8IV36 788 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 TP53I13Q8NBR0 393 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-202ENST00000380276 WDR48Q8TAF3 677 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 TTYH3Q9C0H2 523 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 CLPBQ9H078 707 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 CLSTN2Q9H4D0 955 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 RETREG1Q9H6L5 497 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 EPB41L5Q9HCM4 733 aa23.38■■□□□ 1.33
U2AF1-202ENST00000380276 NOCTQ9UK39 431 aaKnown RBP23.38■■□□□ 1.33
U2AF1-202ENST00000380276 COL27A1Q8IZC6 1860 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-202ENST00000380276 CCDC187A0A096LP49 1063 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 C2CD4BA6NLJ0 364 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 CYP1A1P04798 512 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-202ENST00000380276 EPHB2P29323 1055 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 PTPN9P43378 593 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 FMO1Q01740 532 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 TCP11X2Q5H9J9 407 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 SCYL2Q6P3W7 929 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 CCDC81Q6ZN84 652 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 SCG3Q8WXD2 468 aaKnown RBP23.37■■□□□ 1.33
U2AF1-202ENST00000380276 WBP1Q96G27 269 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 PRR11Q96HE9 360 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-202ENST00000380276 EXOC2Q96KP1 924 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 SEMA4CQ9C0C4 833 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 NLRC4Q9NPP4 1024 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 NEU3Q9UQ49 428 aa23.37■■□□□ 1.33
U2AF1-202ENST00000380276 PIGNO95427 931 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 KRT3P12035 628 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 GPD1P21695 349 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 KLK7P49862 253 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 BLKP51451 505 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 HDAC4P56524 1084 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 POLR2FP61218 127 aaKnown RBP23.36■■□□□ 1.33
U2AF1-202ENST00000380276 ELOCQ15369 112 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 EFHC2Q5JST6 749 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 CFAP58Q5T655 872 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 ENPP7Q6UWV6 458 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 SLFN11Q7Z7L1 901 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 PYROXD2Q8N2H3 581 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 PCDH19Q8TAB3 1148 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 TSACCQ96A04 125 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-202ENST00000380276 TBATAQ96M53 351 aa23.36■■□□□ 1.33
U2AF1-202ENST00000380276 VPS16Q9H269 839 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms