RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 LIPMQ5VYY2 423 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 PPP2R2DQ66LE6 453 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 STON2Q8WXE9 905 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 C17orf80Q9BSJ5 609 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 TASP1Q9H6P5 420 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 SP110Q9HB58 689 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 MARCH2Q9P0N8 246 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.76■■□□□ 1.07
TRIM54-202ENST00000380075 ACOT9Q9Y305 439 aa21.76■■□□□ 1.07
TRIM54-202ENST00000380075 E2F8A0AVK6 867 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 DRGXA6NNA5 263 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 NT5C1B-RDH14C9J2C7 533 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 H7C4K7 107 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 PAPSS2O95340 614 aaPredicted RBP21.75■■□□□ 1.07
TRIM54-202ENST00000380075 SLC35E2BP0CK96 405 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 ARNTP27540 789 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 GABRB3P28472 473 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 CD151P48509 253 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 KPNA2P52292 529 aaKnown RBP21.75■■□□□ 1.07
TRIM54-202ENST00000380075 ASPHQ12797 758 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 ACCSLQ4AC99 568 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 HMCESQ96FZ2 354 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 RSRC1Q96IZ7 334 aaKnown RBP21.75■■□□□ 1.07
TRIM54-202ENST00000380075 CERS4Q9HA82 394 aa21.75■■□□□ 1.07
TRIM54-202ENST00000380075 GBF1Q92538 1859 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 GALTP07902 379 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 CPB1P15086 417 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 STMN1P16949 149 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 ARRB2P32121 409 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 SLC11A1P49279 550 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 YBEYP58557 167 aaPredicted RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 PSMD5Q16401 504 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 PARP15Q460N3 678 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 METTL21CQ5VZV1 264 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 MAVSQ7Z434 540 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 RBM15BQ8NDT2 890 aaKnown RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 ACVR1CQ8NER5 493 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 STYXQ8WUJ0 223 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 LRCH3Q96II8 777 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 A0A087X1B8 175 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 FAM95CA0A1B0GW59 222 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 MTMR11A4FU01 709 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 DIAPH2O60879 1101 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 ENTPD5O75356 428 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 SNUPNO95149 360 aaKnown RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 GMPRP36959 345 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 MAPKAPK2P49137 400 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 ALDH7A1P49419 539 aaKnown RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 SERPINH1P50454 418 aaKnown RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 POU4F1Q01851 419 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 CNGA3Q16281 694 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 FSCBQ5H9T9 825 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 CFAP157Q5JU67 520 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 RFWD3Q6PCD5 774 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 TFAP2DQ7Z6R9 452 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 GALNT7Q86SF2 657 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 GPR62Q9BZJ7 368 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 ILKAPQ9H0C8 392 aaPredicted RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 RETREG1Q9H6L5 497 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 NKX1-2Q9UD57 310 aaPredicted RBP21.74■■□□□ 1.07
TRIM54-202ENST00000380075 PLA2G4CQ9UP65 541 aa21.74■■□□□ 1.07
TRIM54-202ENST00000380075 CCDC78A2IDD5 438 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 LAG3P18627 525 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 BMPR1AP36894 532 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 KDSRQ06136 332 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 IL10RBQ08334 325 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 TAF10Q12962 218 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 HABP4Q5JVS0 413 aaKnown RBP21.73■■□□□ 1.07
TRIM54-202ENST00000380075 C10orf120Q5SQS8 335 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 FBXL22Q6P050 247 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 TLDC1Q6P9B6 456 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 ATG14Q6ZNE5 492 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 TMEM173Q86WV6 379 aaPredicted RBP21.73■■□□□ 1.07
TRIM54-202ENST00000380075 TTC8Q8TAM2 541 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 CEP295NLQ96MC4 621 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 CDK5RAP1Q96SZ6 601 aaKnown RBP21.73■■□□□ 1.07
TRIM54-202ENST00000380075 TMEM175Q9BSA9 504 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 GATA5Q9BWX5 397 aaPredicted RBP21.73■■□□□ 1.07
TRIM54-202ENST00000380075 DRC3Q9H069 523 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 NT5MQ9NPB1 228 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 MARCH5Q9NX47 278 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 FBXO5Q9UKT4 447 aa21.73■■□□□ 1.07
TRIM54-202ENST00000380075 F8W8V4 182 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 TBC1D4O60343 1298 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 TM7SF2O76062 418 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 HAPLN1P10915 354 aaPredicted RBP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 CTNNB1P35222 781 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SLC1A2P43004 574 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 MPP1Q00013 466 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SEPT6Q14141 434 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 UBAP2LQ14157 1087 aaKnown RBP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 MGAT5BQ3V5L5 792 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ALFQ53S48 1182 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 LRRC8EQ6NSJ5 796 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 NEPROQ6NW34 567 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 FUT10Q6P4F1 479 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 EPGNQ6UW88 154 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 NAPRTQ6XQN6 538 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SLC41A1Q8IVJ1 513 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 DENND6AQ8IWF6 608 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms