RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 APOL1O14791 398 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 HGSO14964 777 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 KCNN4O15554 427 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 CCDC22O60826 627 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 TOP3BO95985 862 aaKnown RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ATP5BP06576 529 aaKnown RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 BPGMP07738 259 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 PIM1P11309 404 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 NCAM1P13591 858 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ALDH3A1P30838 453 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ATP5C1P36542 298 aaKnown RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 GRIA1P42261 906 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 NRIP1P48552 1158 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 NUMBP49757 651 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 PGFP49763 221 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ATXN1P54253 815 aaKnown RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 BST1Q10588 318 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 DCAF6Q58WW2 860 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ZNF449Q6P9G9 518 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 PALM2Q8IXS6 379 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ZNF683Q8IZ20 524 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 MICAL1Q8TDZ2 1067 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 PABPC5Q96DU9 382 aaKnown RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 MTBPQ96DY7 904 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 MSLNLQ96KJ4 702 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 CALN1Q9BXU9 219 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 TRIM55Q9BYV6 548 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 CCSER2Q9H7U1 834 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 DCLRE1BQ9H816 532 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 DTLQ9NZJ0 730 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 DNMT3BQ9UBC3 853 aaKnown RBP7.84□□□□□ -1.15
CDKL5-202ENST00000379996 SUFUQ9UMX1 484 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 ARHGAP26Q9UNA1 814 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 RAD54BQ9Y620 910 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 KIAA1549LQ6ZVL6 1849 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 CHD9Q3L8U1 2897 aa7.84□□□□□ -1.15
CDKL5-202ENST00000379996 IGLV3-10A0A075B6K4 115 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 TRIM49D1C9J1S8 452 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 FCHO1O14526 889 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 GREM1O60565 184 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 MT-ND3P03897 115 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 MLNP12872 115 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 AOC1P19801 751 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF697Q5TEC3 545 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 SDHAF4Q5VUM1 108 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 FYB2Q5VWT5 728 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 C1orf228Q6PIY5 440 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 Q6ZNB5 142 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 GAREM2Q75VX8 874 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 MYLK4Q86YV6 388 aaPredicted RBP7.84□□□□□ -1.16
CDKL5-202ENST00000379996 CCDC185Q8N715 623 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 GSDMBQ8TAX9 411 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 SHKBP1Q8TBC3 707 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 RNF139Q8WU17 664 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 RSRC1Q96IZ7 334 aaKnown RBP7.84□□□□□ -1.16
CDKL5-202ENST00000379996 CSPG4P5Q96PW8 444 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 PIGVQ9NUD9 493 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 NMRK1Q9NWW6 199 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 NEU3Q9UQ49 428 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 COL4A3Q01955 1670 aa7.84□□□□□ -1.16
CDKL5-202ENST00000379996 WDR91A4D1P6 747 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 CAPN9O14815 690 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 COCHO43405 550 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 HAUS5O94927 633 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 SNRPAP09012 282 aaKnown RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TROVE2P10155 538 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 MYL2P10916 166 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 CCR1P32246 355 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 NR2C2P49116 596 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 RASSF2P50749 326 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 ARFIP2P53365 341 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 DEUP1Q05D60 604 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 PCLAFQ15004 111 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 ARL13BQ3SXY8 428 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TCEAL5Q5H9L2 206 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TEX9Q8N6V9 391 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 GPATCH11Q8N954 259 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 ZSCAN18Q8TBC5 510 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 CCDC110Q8TBZ0 833 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 NDRG1Q92597 394 aaKnown RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 GCNAQ96QF7 691 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TUBB6Q9BUF5 446 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TASP1Q9H6P5 420 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 CLEC1BQ9P126 229 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 STX18Q9P2W9 335 aaKnown RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 CHD5Q8TDI0 1954 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 I6L893 689 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 M0QYT0 321 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 PIK3R2O00459 728 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 BUD23O43709 281 aaKnown RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 PRPSAP2O60256 369 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TLR5O60602 858 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TBX10O75333 385 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 ADRA1BP35368 520 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 COG7P83436 770 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 DPYSQ14117 519 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 KPNB1Q14974 876 aaKnown RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 ARHGAP15Q53QZ3 475 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms