RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 DGKKQ5KSL6 1271 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CERCAMQ5T4B2 595 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 TMEM135Q86UB9 458 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 DNAAF3Q8N9W5 541 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 MYLIPQ8WY64 445 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 STAMBPL1Q96FJ0 436 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 RPL10LQ96L21 214 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GUCD1Q96NT3 240 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ACSS3Q9H6R3 686 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 MRM3Q9HC36 420 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GTSE1Q9NYZ3 720 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 F5P12259 2224 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PLXNB3Q9ULL4 1909 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 FAM237BA0A1B0GVD1 139 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 FZD6O60353 706 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 USP1O94782 785 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ALDH1A2O94788 518 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GSRP00390 522 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PRLP01236 227 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 FGF1P05230 155 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SRPRAP08240 638 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 KCNA5P22460 613 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PRKCHP24723 683 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GDI1P31150 447 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 MAPK8P45983 427 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 NR1H3Q13133 447 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 FRG1Q14331 258 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 STAT4Q14765 748 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CRYMQ14894 314 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 EIF4HQ15056 248 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SIRPB2Q5JXA9 342 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ATXN7L2Q5T6C5 722 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GRAMD4Q6IC98 578 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 C3orf62Q6ZUJ4 267 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CYS1Q717R9 158 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SRLQ86TD4 932 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PALM2Q8IXS6 379 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PLPP6Q8IY26 295 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PCDH20Q8N6Y1 951 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 OR2AP1Q8NGE2 309 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GSDMBQ8TAX9 411 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 RANBP9Q96S59 729 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 RUFY1Q96T51 708 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 KIFC1Q9BW19 673 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ROPN1BQ9BZX4 212 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 VPS37BQ9H9H4 285 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ROPN1Q9HAT0 212 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 DEC1Q9P2X7 70 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PRKAG3Q9UGI9 489 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ERVW-1Q9UQF0 538 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 MAD1L1Q9Y6D9 718 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PLXNA2O75051 1894 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 C2CD4DB7Z1M9 353 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 PRRT4C9JH25 899 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 NDST3O95803 873 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 IGSF6O95976 241 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 GCAP28676 217 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 SLC6A11P48066 632 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 TRAF2Q12933 501 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 RASA2Q15283 850 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 ITPRIPL2Q3MIP1 535 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 PCID2Q5JVF3 399 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 CEP85LQ5SZL2 805 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 CAPN12Q6ZSI9 719 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 Q7L0L9 218 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 TDRPQ86YL5 185 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 RNF135Q8IUD6 432 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 TERB1Q8NA31 727 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 KDM1BQ8NB78 822 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 FRS2Q8WU20 508 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 CFAP36Q96G28 342 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 DHRS4Q9BTZ2 278 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 TM6SF2Q9BZW4 377 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 MOCS1Q9NZB8 636 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 SLCO3A1Q9UIG8 710 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 TCAF1Q9Y4C2 921 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 RAI2Q9Y5P3 530 aa12.1□□□□□ -0.47
EXOSC9-202ENST00000379663 COL6A3P12111 3177 aa12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 ZCWPW2A0A1B0GU75 182 aa12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 WASH3PC4AMC7 463 aa12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 H3BQF6 201 aa12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
EXOSC9-202ENST00000379663 HTRA2O43464 458 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms