RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 SPTLC1O15269 473 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 MFSD11O43934 449 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 POU2F2P09086 479 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 CDH5P33151 784 aaPredicted RBP7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 PLK1P53350 603 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 NME5P56597 212 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 NAA20P61599 178 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 AQP6Q13520 282 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 PDPK2PQ6A1A2 396 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 SLC26A11Q86WA9 606 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 MARVELD2Q8N4S9 558 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 FAM86B1Q8N7N1 296 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 NIPA2Q8N8Q9 360 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 SGF29Q96ES7 293 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 SIAEQ9HAT2 523 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 COPG2Q9UBF2 871 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 GIT1Q9Y2X7 761 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 PCDHB12Q9Y5F1 795 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 SNX9Q9Y5X1 595 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 GREB1Q4ZG55 1949 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 APOC4-APOC2K7ER74 178 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 APOC2P02655 101 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 ATP6V1B2P21281 511 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 PSMC1P62191 440 aaKnown RBP7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 USP41Q3LFD5 358 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 SYPL2Q5VXT5 272 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 NOTUMQ6P988 496 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 EPGNQ6UW88 154 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 LAYNQ6UX15 382 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 LDB1Q86U70 411 aaPredicted RBP7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 DBF4BQ8NFT6 615 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 NR1H4Q96RI1 486 aaPredicted RBP7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 SSU72Q9NP77 194 aaKnown RBP7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 EXD2Q9NVH0 621 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 ASB1Q9Y576 335 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 MAD1L1Q9Y6D9 718 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 PMF1-BGLAPU3KQ54 211 aa7.45□□□□□ -1.22
GPCPD1-201ENST00000379019 H3BNC9 293 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 EXTL3O43909 919 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 APOEP02649 317 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 FYNP06241 537 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ALDOCP09972 364 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 COX4I1P13073 169 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF182P17025 639 aaPredicted RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 IDUAP35475 653 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 SLC5A3P53794 718 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ECT2LQ008S8 904 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 GSTM4Q03013 218 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 BNIP3Q12983 259 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 PTPRCAPQ14761 206 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 PACS1Q6VY07 963 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 STXBP4Q6ZWJ1 553 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF513Q8N8E2 541 aaPredicted RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 KLHL23Q8NBE8 558 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 FAF2Q96CS3 445 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 MRPL38Q96DV4 380 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 BICD1Q96G01 975 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 RNF157Q96PX1 679 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 YME1L1Q96TA2 773 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 MRPL45Q9BRJ2 306 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 NKX2-4Q9H2Z4 354 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 WDR70Q9NW82 654 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 SMOXQ9NWM0 555 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 CXXC1Q9P0U4 656 aaPredicted RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 EPS15L1Q9UBC2 864 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 PADI3Q9ULW8 664 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 UBE4BO95155 1302 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ASPDHA6ND91 283 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 SERPINB7O75635 380 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ZFP36L2P47974 494 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 NUDT2P50583 147 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 TFAMQ00059 246 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 GPNMBQ14956 572 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 PPP2R5EQ16537 467 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 ARL13AQ5H913 290 aaPredicted RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 DNAJC24Q6P3W2 148 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 DSG4Q86SJ6 1040 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 RFX6Q8HWS3 928 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 PQLC1Q8N2U9 271 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 DCLK2Q8N568 766 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 VWCEQ96DN2 955 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 RUBCNLQ9H714 662 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 NOL11Q9H8H0 719 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 POLE4Q9NR33 117 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 DOCK6Q96HP0 2047 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 A0A0U1RQF3 1178 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 SSX4O60224 188 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 TIPRLO75663 272 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 FOSL2P15408 326 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 GNA12Q03113 381 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 DMP1Q13316 513 aaPredicted RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 DEFB128Q7Z7B8 93 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 CRIPAKQ8N1N5 446 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 CEP70Q8NHQ1 597 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 SCLYQ96I15 445 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 GBP5Q96PP8 586 aa7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 PAK1IP1Q9NWT1 392 aaPredicted RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 CPSF3Q9UKF6 684 aaKnown RBP7.44□□□□□ -1.22
GPCPD1-201ENST00000379019 COPG1Q9Y678 874 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms