RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CAMKK2Q96RR4 588 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 IL1RL2Q9HB29 575 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 NCKIPSDQ9NZQ3 722 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 HEATR9A2RTY3 570 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 SAC3D1A6NKF1 404 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 C9JVG2 144 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 ALDH3B2P48448 385 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 HK2P52789 917 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 LPIN1Q14693 890 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 DCAF4L1Q3SXM0 396 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 CHSY3Q70JA7 882 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 CANT1Q8WVQ1 401 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 HDAC11Q96DB2 347 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 OSBPL11Q9BXB4 747 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 MRPL46Q9H2W6 279 aaKnown RBP18.17■□□□□ 0.5
GNE-201ENST00000377902 MYRFQ9Y2G1 1151 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 UBDO15205 165 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 CHRNA4P43681 627 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 NOMO2Q5JPE7 1267 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 POTEHQ6S545 545 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 ZBTB49Q6ZSB9 765 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 FIBCD1Q8N539 461 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 RMND5BQ96G75 393 aaPredicted RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 TRIM8Q9BZR9 551 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 DNAI2Q9GZS0 605 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 OR12D3Q9UGF7 316 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 FBXW11Q9UKB1 542 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 PADI4Q9UM07 663 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 DERAQ9Y315 318 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 TRPC5OSA6NMA1 111 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 FZD9O00144 591 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 DFFAO00273 331 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 SEC24DO94855 1032 aaPredicted RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 LRIG2O94898 1065 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 GRIA3P42263 894 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 ARCN1P48444 511 aaKnown RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 CDK9P50750 372 aaKnown RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 GALNT2Q10471 571 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 ITPRIPL1Q6GPH6 555 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 TAPT1Q6NXT6 567 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 PKN3Q6P5Z2 889 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 PDZD4Q76G19 769 aaPredicted RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 SLC45A3Q96JT2 553 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 HNRNPABQ99729 332 aaKnown RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 HAUS8Q9BT25 410 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 DCUN1D5Q9BTE7 237 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 SPAG4Q9NPE6 437 aa18.16■□□□□ 0.5
GNE-201ENST00000377902 CHCHD3Q9NX63 227 aaKnown RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 UTP6Q9NYH9 597 aaKnown RBP18.16■□□□□ 0.5
GNE-201ENST00000377902 ERI2A8K979 691 aaKnown RBP18.15■□□□□ 0.5
GNE-201ENST00000377902 AKAP10O43572 662 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 TPST1O60507 370 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 HUS1O60921 280 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 CLIC3O95833 236 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 HADHAP40939 763 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 SLC7A2P52569 658 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 PRKCQQ04759 706 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 ZNF470Q6ECI4 717 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 NAPEPLDQ6IQ20 393 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 ERI1Q8IV48 349 aaKnown RBP18.15■□□□□ 0.5
GNE-201ENST00000377902 TKTL2Q9H0I9 626 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 CD300AQ9UGN4 299 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
GNE-201ENST00000377902 TCRBV3S1A0A5B6 114 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 MRASO14807 208 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 ENTPD1P49961 510 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 PRKAA2P54646 552 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 LILRA4P59901 499 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 PLOD1Q02809 727 aaPredicted RBP18.15■□□□□ 0.5
GNE-201ENST00000377902 NHSL2Q5HYW2 709 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 RPL10LQ96L21 214 aaKnown RBP18.15■□□□□ 0.5
GNE-201ENST00000377902 RANBP9Q96S59 729 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 OLFM1Q99784 485 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 FICDQ9BVA6 458 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 RHOBTB2Q9BYZ6 727 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 ADAMTS10Q9H324 1103 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 IGSF5Q9NSI5 407 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 GIMAP2Q9UG22 337 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 TRHDEQ9UKU6 1024 aa18.15■□□□□ 0.5
GNE-201ENST00000377902 TIMM13Q9Y5L4 95 aaPredicted RBP18.15■□□□□ 0.5
GNE-201ENST00000377902 TSC2P49815 1807 aa18.14■□□□□ 0.5
GNE-201ENST00000377902 UBFD1O14562 309 aaKnown RBP18.14■□□□□ 0.49
GNE-201ENST00000377902 NPHS1O60500 1241 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 SLC25A27O95847 323 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 CYP2C9P11712 490 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 ATP6V1B2P21281 511 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 SLC7A1P30825 629 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 SOX11P35716 441 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 TAF6P49848 677 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 STX5Q13190 355 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 CUZD1Q86UP6 607 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 TNIP3Q96KP6 325 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 AURKCQ9UQB9 309 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 PTGDR2Q9Y5Y4 395 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 PMPCBO75439 489 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 GPC4O75487 556 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 PCID2Q5JVF3 399 aa18.14■□□□□ 0.49
GNE-201ENST00000377902 BTBD8Q5XKL5 378 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms