RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TACR2P21452 398 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 DNAJB1P25685 340 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 ACVRL1P37023 503 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 GRIA4P48058 902 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 MAPKAPK2P49137 400 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 KCNQ1P51787 676 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 KPNB1Q14974 876 aaKnown RBP20.41■□□□□ 0.86
VSX1-202ENST00000376709 DNAL1Q4LDG9 190 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 ARMC3Q5W041 872 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 NADSYN1Q6IA69 706 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 TLDC1Q6P9B6 456 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 KIAA0408Q6ZU52 694 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 SPATA6LQ8N4H0 392 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 FBXO22Q8NEZ5 403 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 STYXQ8WUJ0 223 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 SBK3P0C264 359 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 TPBGLP0DKB5 382 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 PRKAA2P54646 552 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 YBEYP58557 167 aaPredicted RBP20.4■□□□□ 0.86
VSX1-202ENST00000376709 TAS2R39P59534 338 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 MTA1Q13330 715 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 KHDC1Q4VXA5 237 aaKnown RBP20.4■□□□□ 0.86
VSX1-202ENST00000376709 LGI2Q8N0V4 545 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 PGBD5Q8N414 524 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 ENDOVQ8N8Q3 282 aaKnown RBP20.4■□□□□ 0.86
VSX1-202ENST00000376709 NXNL1Q96CM4 212 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 MYEOVQ96EZ4 313 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 FAM161BQ96MY7 647 aa20.4■□□□□ 0.86
VSX1-202ENST00000376709 POLR1EQ9GZS1 481 aaKnown RBP20.4■□□□□ 0.86
VSX1-202ENST00000376709 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.4■□□□□ 0.86
VSX1-202ENST00000376709 AURKAO14965 403 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 UPP2O95045 317 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 POU4F1Q01851 419 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 ZNF235Q14590 738 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 TSNAXIP1Q2TAA8 658 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 SIRPB2Q5JXA9 342 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 CNSTQ6PJW8 725 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 CFAP52Q8N1V2 620 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 LRRC43Q8N309 656 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 GIMAP7Q8NHV1 300 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 ARRDC2Q8TBH0 407 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 MOCOSQ96EN8 888 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 UNKQ9C0B0 810 aaKnown RBP20.39■□□□□ 0.86
VSX1-202ENST00000376709 DRC3Q9H069 523 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 ACSS2Q9NR19 701 aa20.39■□□□□ 0.86
VSX1-202ENST00000376709 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 A0A087X1B8 175 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 MAGEC1O60732 1142 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 CHRNGP07510 517 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 ATP5C1P36542 298 aaKnown RBP20.39■□□□□ 0.85
VSX1-202ENST00000376709 NAGLUP54802 743 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 TNK2Q07912 1038 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 IHHQ14623 411 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 TMCO4Q5TGY1 634 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 EPGNQ6UW88 154 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 OR13J1Q8NGT2 312 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 IFT43Q96FT9 208 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 ZNF512Q96ME7 567 aaPredicted RBP20.39■□□□□ 0.85
VSX1-202ENST00000376709 CDK5RAP1Q96SZ6 601 aaKnown RBP20.39■□□□□ 0.85
VSX1-202ENST00000376709 NDNQ99608 321 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 SEMA3CQ99985 751 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 MAN1C1Q9NR34 630 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 DNMT3LQ9UJW3 386 aa20.39■□□□□ 0.85
VSX1-202ENST00000376709 PAPSS2O95340 614 aaPredicted RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 CXCL10P02778 98 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 GNAZP19086 355 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 ALDH7A1P49419 539 aaKnown RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 KPNA2P52292 529 aaKnown RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.38■□□□□ 0.85
VSX1-202ENST00000376709 PTAR1Q7Z6K3 402 aaPredicted RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 OR6P1Q8NGX9 317 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 STMN2Q93045 179 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 OMDQ99983 421 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 C1orf21Q9H246 121 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 RAP2CQ9Y3L5 183 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 MKI67P46013 3256 aaKnown RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 MEI4A8MW99 385 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 ADAM12O43184 909 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 PRAMEF11O60813 436 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 RPL17P18621 184 aaKnown RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 MPSTP25325 297 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 PRAMEP78395 509 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 SLC9B1Q4ZJI4 515 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 ACSBG2Q5FVE4 666 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 RBM20Q5T481 1227 aaKnown RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 SCUBE1Q8IWY4 988 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 POU5F2Q8N7G0 328 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 WDR60Q8WVS4 1066 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 N4BP2L2Q92802 583 aaPredicted RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 ZNF570Q96NI8 536 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 GPR78Q96P69 363 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 THTPAQ9BU02 230 aa20.38■□□□□ 0.85
VSX1-202ENST00000376709 MRPL46Q9H2W6 279 aaKnown RBP20.38■□□□□ 0.85
VSX1-202ENST00000376709 TARM1B6A8C7 271 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 E9PBE3 544 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 KLHL41O60662 606 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 GJB3O75712 270 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 PIGNO95427 931 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 LEPRP48357 1165 aaKnown RBP20.37■□□□□ 0.85
VSX1-202ENST00000376709 RPL14P50914 215 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms