RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 NOTCH4Q99466 2003 aa17.85■□□□□ 0.45
CTTN-203ENST00000376561 TIMM44O43615 452 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SNX3O60493 162 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 TMCC1O94876 653 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 TYK2P29597 1187 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SLC5A9Q2M3M2 681 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 TPGS1Q6ZTW0 290 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 FAM47EQ6ZV65 393 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SPATS2Q86XZ4 545 aaKnown RBP17.84■□□□□ 0.45
CTTN-203ENST00000376561 TRIB3Q96RU7 358 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 PITPNM3Q9BZ71 974 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 TASP1Q9H6P5 420 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SCUBE2Q9NQ36 999 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 PLK2Q9NYY3 685 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 MTO1Q9Y2Z2 717 aaKnown RBP17.84■□□□□ 0.45
CTTN-203ENST00000376561 MROH6A6NGR9 719 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 PAPSS2O95340 614 aaPredicted RBP17.84■□□□□ 0.45
CTTN-203ENST00000376561 TOP3BO95985 862 aaKnown RBP17.84■□□□□ 0.45
CTTN-203ENST00000376561 HNRNPA1P09651 372 aaKnown RBP eCLIP17.84■□□□□ 0.45
CTTN-203ENST00000376561 CES1P23141 567 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 ABCG1P45844 678 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SF3A3Q12874 501 aaKnown RBP eCLIP17.84■□□□□ 0.457e-8■■■■□ 20.9
CTTN-203ENST00000376561 GALNT3Q14435 633 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 INO80DQ53TQ3 878 aaPredicted RBP17.84■□□□□ 0.45
CTTN-203ENST00000376561 RNF135Q8IUD6 432 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 DCAF4L2Q8NA75 395 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 CCDC197Q8NCU1 140 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 VPS39Q96JC1 886 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 CABS1Q96KC9 395 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 NUDCD1Q96RS6 583 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SLCO1B3Q9NPD5 702 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 SNX15Q9NRS6 342 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 VPS51Q9UID3 782 aa17.84■□□□□ 0.45
CTTN-203ENST00000376561 E2F8A0AVK6 867 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 PER2O15055 1255 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 SIN3BO75182 1162 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 NDST3O95803 873 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 MAGEA12P43365 314 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 SERPINB4P48594 390 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 SERPINB8P50452 374 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 THOC5Q13769 683 aaKnown RBP17.83■□□□□ 0.45
CTTN-203ENST00000376561 ARHGAP15Q53QZ3 475 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 MICALCLQ6ZW33 695 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 CMC1Q7Z7K0 106 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 ZC3HC1Q86WB0 502 aaKnown RBP17.83■□□□□ 0.45
CTTN-203ENST00000376561 DENND6AQ8IWF6 608 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 OR13J1Q8NGT2 312 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 PTPRN2Q92932 1015 aa17.83■□□□□ 0.45
CTTN-203ENST00000376561 LDB2O43679 373 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 XYLBO75191 536 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 AHSGP02765 367 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 GABRB3P28472 473 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 CTBP1Q13363 440 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 FYB2Q5VWT5 728 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 CGB2Q6NT52 195 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 C6orf89Q6UWU4 347 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 NLRP9Q7RTR0 991 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 APCDD1Q8J025 514 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 LEMD2Q8NC56 503 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 ARMC2Q8NEN0 867 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 RIN3Q8TB24 985 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 RHOJQ9H4E5 214 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 MANSC1Q9H8J5 431 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 GGT7Q9UJ14 662 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 CLEC4EQ9ULY5 219 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 PHTF1Q9UMS5 762 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 CHKBQ9Y259 395 aa17.83■□□□□ 0.44
CTTN-203ENST00000376561 GLRA3O75311 464 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 PRKCGP05129 697 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 NTHL1P78549 312 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 UGP2Q16851 508 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 PPM1JQ5JR12 505 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 ZNF697Q5TEC3 545 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 RNF43Q68DV7 783 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 PDE12Q6L8Q7 609 aaKnown RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 ANKS4BQ8N8V4 417 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 BLOC1S5Q8TDH9 187 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 USP13Q92995 863 aaPredicted RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 GRAMD1AQ96CP6 724 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 SAMD11Q96NU1 681 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 GPR22Q99680 433 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 FAM167BQ9BTA0 163 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 TDRD1Q9BXT4 1180 aaKnown RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 LHX3Q9UBR4 397 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 DCDC2Q9UHG0 476 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 ARIH1Q9Y4X5 557 aaPredicted RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 HCFC2Q9Y5Z7 792 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 ANKRD36A6QL64 1941 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 EDF1O60869 148 aaKnown RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 SLC1A2P43004 574 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTTN-203ENST00000376561 GPM6BQ13491 265 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 ITIH4Q14624 930 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 GRM3Q14832 879 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 ZNF470Q6ECI4 717 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 NEPROQ6NW34 567 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 KYAT3Q6YP21 454 aaKnown RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 C2CD4AQ8NCU7 369 aaPredicted RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 ACVR1CQ8NER5 493 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms