RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 G3V2L1 256 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 TM7SF2O76062 418 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 CHRNA4P43681 627 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 HPCAP84074 193 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 MED21Q13503 144 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 ALFQ53S48 1182 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 FBXL19Q6PCT2 694 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 RANBP10Q6VN20 620 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 NET1Q7Z628 596 aaPredicted RBP14.12□□□□□ -0.15
MSH5-202ENST00000375740 MIB1Q86YT6 1006 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 LRRC49Q8IUZ0 686 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 UMODL1-AS1Q8N2C9 162 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PPHLN1Q8NEY8 458 aaKnown RBP14.12□□□□□ -0.15
MSH5-202ENST00000375740 DBF4BQ8NFT6 615 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PPP4R1Q8TF05 950 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 GPR22Q99680 433 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 FSD1LQ9BXM9 530 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PRDM5Q9NQX1 630 aaPredicted RBP14.12□□□□□ -0.15
MSH5-202ENST00000375740 NSMCE4AQ9NXX6 385 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 HCSTQ9UBK5 93 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 SLC2A6Q9UGQ3 507 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PCDHB7Q9Y5E2 793 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 J3KR12 359 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 ARVCFO00192 962 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 NBNO60934 754 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 TRPA1O75762 1119 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PEX11BO96011 259 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 ALDH2P05091 517 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 HMBSP08397 361 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 RHOQP17081 205 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PEX2P28328 305 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 CTBP1Q13363 440 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 HNRNPDQ14103 355 aaKnown RBP14.12□□□□□ -0.15
MSH5-202ENST00000375740 GPNMBQ14956 572 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 PCSK7Q16549 785 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 ANO4Q32M45 955 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 POTEHQ6S545 545 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 DENND6AQ8IWF6 608 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 FBXO32Q969P5 355 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 SIKE1Q9BRV8 207 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 CCDC106Q9BWC9 280 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 ZYG11BQ9C0D3 744 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 RHOJQ9H4E5 214 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 NMRAL1Q9HBL8 299 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 TCAF1Q9Y4C2 921 aa14.12□□□□□ -0.15
MSH5-202ENST00000375740 SERPINA6P08185 405 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 HAPLN1P10915 354 aaPredicted RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 COL6A1P12109 1028 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 SELPP16109 830 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 VCLP18206 1134 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 HADHAP40939 763 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 ARCN1P48444 511 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 HARS2P49590 506 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 TAF10Q12962 218 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 TUBB3Q13509 450 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 MAP7Q14244 749 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 USP10Q14694 798 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 CNGA3Q16281 694 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 ZNF280DQ6N043 979 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 PAOXQ6QHF9 649 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 RSPO2Q6UXX9 243 aaPredicted RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 RBM44Q6ZP01 1051 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 ATP6V0D2Q8N8Y2 350 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 IGSF8Q969P0 613 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 HMCESQ96FZ2 354 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 CASD1Q96PB1 797 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 PPP1R2P1Q96PQ5 205 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 CCDC28BQ9BUN5 200 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 CRISPLD1Q9H336 500 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 TLK1Q9UKI8 766 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 HTTP42858 3142 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 FNDC1Q4ZHG4 1894 aaPredicted RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 MYLKQ15746 1914 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 TXNDC9O14530 226 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 PHGDHO43175 533 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 INHAP05111 366 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 CPB1P15086 417 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 FGFR3P22607 806 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 ARNTP27540 789 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 CSRP3P50461 194 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 GALK1P51570 392 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 NDST2P52849 883 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 WNT3AP56704 352 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 MPP1Q00013 466 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 ITKQ08881 620 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 UBAP2LQ14157 1087 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 TRMT5Q32P41 509 aaKnown RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 NAPRTQ6XQN6 538 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 MAVSQ7Z434 540 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 CCDC117Q8IWD4 279 aaPredicted RBP14.11□□□□□ -0.15
MSH5-202ENST00000375740 PXYLP1Q8TE99 480 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 KLHL5Q96PQ7 755 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 NT5MQ9NPB1 228 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.11□□□□□ -0.153e-9■■□□□ 13
MSH5-202ENST00000375740 FNIP2Q9P278 1114 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 DOCK4Q8N1I0 1966 aa14.11□□□□□ -0.15
MSH5-202ENST00000375740 MYOCOSA0A1B0GUC4 107 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 FAM92AA1XBS5 289 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms