RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ASB3Q9Y575 518 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ZNF682O95780 498 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ZDHHC11BP0C7U3 371 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 COL6A2P12110 1019 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ENDOUP21128 410 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 HTR2BP41595 481 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PTPN21Q16825 1174 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CREB3L2Q70SY1 520 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ANKRD52Q8NB46 1076 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 NXF1Q9UBU9 619 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 SLC16A1P53985 500 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 IL18Q14116 193 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 KLHL22Q53GT1 634 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 KANK2Q63ZY3 851 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CDCA2Q69YH5 1023 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 LRRC47Q8N1G4 583 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 FAM109AQ8N4B1 249 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PIH1D2Q8WWB5 315 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 C11orf70Q9BRQ4 267 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 C2orf81A6NN90 581 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ARF4P18085 180 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 CYP3A5P20815 502 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 GALNTL6Q49A17 601 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 GRHL2Q6ISB3 625 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 DPP8Q6V1X1 898 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 DNAJC14Q6Y2X3 702 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 C2orf49Q9BVC5 232 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 KLHL11Q9NVR0 708 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CLEC4AQ9UMR7 237 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 MGAT4BQ9UQ53 548 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CASKO14936 926 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 RLN1P04808 185 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 GMPSP49915 693 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 NOMO2Q5JPE7 1267 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 GLRA4Q5JXX5 417 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF317Q96PQ6 595 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 PSKH2Q96QS6 385 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 C2orf40Q9H1Z8 148 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 COQ10BQ9H8M1 238 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF225Q9UK10 706 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 E2F8A0AVK6 867 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ERI2A8K979 691 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 SLC9A3R1O14745 358 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 CFBP00751 764 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 S100A8P05109 93 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ANXA5P08758 320 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF37AP17032 561 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 IDH2P48735 452 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 FADDQ13158 208 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 RNF212Q495C1 297 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 NSMFQ6X4W1 530 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SMIM15Q7Z3B0 74 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SEPT12Q8IYM1 358 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF655Q8N720 491 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 UCMAQ8WVF2 138 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SH2D3AQ9BRG2 576 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 PBDC1Q9BVG4 233 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CLUHO75153 1309 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 NRP2O60462 931 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CERS1P27544 350 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 YWHAZP63104 245 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 TBC1D25Q3MII6 688 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ARHGAP15Q53QZ3 475 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 A0A0J9YVX5 310 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 NR5A2O00482 541 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 PDCD5O14737 125 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 COL19A1Q14993 1142 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 HSPBAP1Q96EW2 488 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 VAT1Q99536 393 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CATSPERBQ9H7T0 1116 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 TMEM8AQ9HCN3 771 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SAMHD1Q9Y3Z3 626 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 ARHGEF10O15013 1369 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 DENND3A2RUS2 1198 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 J3QR89 54 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 TADA2AO75478 443 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF432O94892 652 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 AP2A2O94973 939 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 PLEKHG7Q6ZR37 379 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 BPIFB1Q8TDL5 484 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 DNAJB3Q8WWF6 145 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CADM1Q9BY67 442 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 DPAGT1Q9H3H5 408 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 NUDT15Q9NV35 164 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 MAFFQ9ULX9 164 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 RGS14O43566 566 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CREMQ03060 361 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 BTF3L4Q96K17 158 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CEP41Q9BYV8 373 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 RERGLQ9H628 205 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 EIF1AYO14602 144 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 RIMBP2O15034 1052 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 EIF1AXP47813 144 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 PTSQ03393 145 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 EXOC3L2Q2M3D2 409 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 AMIGO2Q86SJ2 522 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SLC37A3Q8NCC5 494 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms