RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
UBR4-201ENST00000375218 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 NOX1Q9Y5S8 564 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TRIOO75962 3097 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PIP5K1BO14986 540 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TGM6O95932 706 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CAPN1P07384 714 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 UQCRFS1P1P0C7P4 283 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 GFAPP14136 432 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CDC34P49427 236 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 ZNF41P51814 821 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 ARHGEF16Q5VV41 709 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 SULT1C3Q6IMI6 304 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 FSTL4Q6MZW2 842 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 FRMD1Q8N878 549 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 OR6B3Q8NGW1 331 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 EPS8L2Q9H6S3 715 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CRNNQ9UBG3 495 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 CD300AQ9UGN4 299 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TMCO1Q9UM00 188 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PLCL2Q9UPR0 1127 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 OR2AG2A6NM03 316 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PRPS2P11908 318 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 GDF10P55107 478 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PRAMEP78395 509 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 SCRN3Q0VDG4 424 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 RPS6KA2Q15349 733 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PSRC1Q6PGN9 363 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 SLC36A4Q6YBV0 504 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 BTLAQ7Z6A9 289 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CCDC50Q8IVM0 306 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 REXO1L1PQ8IX06 675 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 C12orf50Q8NA57 414 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 CHURC1Q8WUH1 139 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 LPPQ93052 612 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 FAM122AQ96E09 287 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PDLIM5Q96HC4 596 aaKnown RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 ZSCAN5AQ9BUG6 496 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 ERVMER34-1Q9H9K5 563 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 ADAMTS6Q9UKP5 1117 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CHKBQ9Y259 395 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TNRC18O15417 2968 aaPredicted RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 ECE2O60344 883 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 PSIP1O75475 530 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 IL1R1P14778 569 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 HTR1BP28222 390 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 MECP2P51608 486 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 POLD3Q15054 466 aaPredicted RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 PDCD4Q53EL6 469 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 LDLRAP1Q5SW96 308 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 TRAPPC11Q7Z392 1133 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 EIF1ADQ8N9N8 165 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 C11orf65Q8NCR3 313 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 GATA6Q92908 595 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 FEM1CQ96JP0 617 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 HEPHQ9BQS7 1158 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 MRPL37Q9BZE1 423 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 MFFQ9GZY8 342 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 HSD3B7Q9H2F3 369 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 INIPQ9NRY2 104 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 P4HTMQ9NXG6 502 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 ZNF70Q9UC06 446 aaPredicted RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 A0A087WWV3 80 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 SMCO2A6NFE2 343 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 RBBP9O75884 186 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 PTPREP23469 700 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 HOXA6P31267 233 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 ARHGDIAP52565 204 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 PARP6Q2NL67 630 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 RARS2Q5T160 578 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 ARHGAP17Q68EM7 881 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 KCTD11Q693B1 232 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 KIAA1161Q6NSJ0 714 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 PRPF39Q86UA1 669 aaKnown RBP9.12□□□□□ -0.95
UBR4-201ENST00000375218 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 SIX6OS1Q8N1H7 587 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 POU5F2Q8N7G0 328 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 DPF2Q92785 391 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 KLC2Q9H0B6 622 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 DLGAP4Q9Y2H0 992 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 CACNG3O60359 315 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 SERPINB2P05120 415 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 MLNP12872 115 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 PON1P27169 355 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 CHRNA5P30532 468 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 CAPZA2P47755 286 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 P3H1Q32P28 736 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 TMEM31Q5JXX7 168 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 ABHD17CQ6PCB6 329 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 ADGRD1Q6QNK2 874 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 MSANTD1Q6ZTZ1 278 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 Q6ZUG5 572 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 ZNF365Q70YC5 407 aa9.12□□□□□ -0.95
UBR4-201ENST00000375218 PAGE2Q7Z2X7 111 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms