RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 NDFIP2Q9NV92 336 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 DDX18Q9NVP1 670 aaKnown RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 IGSF9Q9P2J2 1179 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 PRPF19Q9UMS4 504 aaKnown RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 NEU3Q9UQ49 428 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 AP4B1Q9Y6B7 739 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 TNFAIP8O95379 198 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 TBX18O95935 607 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 JCHAINP01591 159 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 THRAP10827 490 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 MLNP12872 115 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 MYBPC1Q00872 1141 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 GK3PQ14409 553 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 BEND5Q7L4P6 421 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 TMEM126BQ8IUX1 230 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 MAPK15Q8TD08 544 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 CNBD2Q96M20 576 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 MARCH5Q9NX47 278 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 CHCHD3Q9NX63 227 aaKnown RBP17.09■□□□□ 0.33
PHF1-202ENST00000374516 SYBUQ9NX95 663 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 SYN3O14994 580 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 CPB1P15086 417 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 GLDCP23378 1020 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 SERPINB5P36952 375 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 CLCN2P51788 898 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 IYDQ6PHW0 289 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 TAS1R1Q7RTX1 841 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 SEPT8Q92599 483 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 APOL2Q9BQE5 337 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 CRISPLD1Q9H336 500 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 EIF2B3Q9NR50 452 aaKnown RBP17.09■□□□□ 0.33
PHF1-202ENST00000374516 MPP6Q9NZW5 540 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 GMIPQ9P107 970 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
PHF1-202ENST00000374516 E2F8A0AVK6 867 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 NFKB1P19838 968 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 NUDT2P50583 147 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 HPCAP84074 193 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 ADGRE1Q14246 886 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 CCDC153Q494R4 210 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 BRMS1LQ5PSV4 323 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 RTP2Q5QGT7 225 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 NAPRTQ6XQN6 538 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 C14orf80Q86SX3 495 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 MON1AQ86VX9 555 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 TICAM1Q8IUC6 712 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 KYQ8NBH2 561 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 ADCY4Q8NFM4 1077 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.33
PHF1-202ENST00000374516 OR52B2Q96RD2 323 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 CDRT15Q96T59 188 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 ELAC1Q9H777 363 aaKnown RBP17.08■□□□□ 0.33
PHF1-202ENST00000374516 DNAAF2Q9NVR5 837 aaKnown RBP17.08■□□□□ 0.33
PHF1-202ENST00000374516 SCML2Q9UQR0 700 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 DMTF1Q9Y222 760 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 RAD54BQ9Y620 910 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.33
PHF1-202ENST00000374516 VWA8A3KMH1 1905 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
PHF1-202ENST00000374516 RGSL1A5PLK6 1076 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 HSPA4LO95757 839 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 COL6A1P12109 1028 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 NUMBP49757 651 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 MRPS22P82650 360 aaKnown RBP17.08■□□□□ 0.32
PHF1-202ENST00000374516 NAB1Q13506 487 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 MRPL58Q14197 206 aaKnown RBP17.08■□□□□ 0.32
PHF1-202ENST00000374516 ARHGEF6Q15052 776 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 ZFP1Q6P2D0 407 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 DSELQ8IZU8 1212 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 PRPF18Q99633 342 aaKnown RBP17.08■□□□□ 0.32
PHF1-202ENST00000374516 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
PHF1-202ENST00000374516 CIDEBQ9UHD4 219 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 RIMS3Q9UJD0 308 aa17.08■□□□□ 0.32
PHF1-202ENST00000374516 PGAM1P18669 254 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 FLOT2Q14254 428 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 ZNF423Q2M1K9 1284 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 MGAT5BQ3V5L5 792 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 FUT10Q6P4F1 479 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 KLC3Q6P597 504 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 RNF19BQ6ZMZ0 732 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 ALDH16A1Q8IZ83 802 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 DNAAF3Q8N9W5 541 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 C8orf48Q96LL4 319 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 COPS7BQ9H9Q2 264 aaPredicted RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 TCF7L2Q9NQB0 619 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 G3BP2Q9UN86 482 aaKnown RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 HS3ST4Q9Y661 456 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 GMEB1Q9Y692 573 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 ARHGAP10A1A4S6 786 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms